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SCNpilot_expt_1000_bf_scaffold_7932_3

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(1479..1766)

Top 3 Functional Annotations

Value Algorithm Source
Protein translocase subunit SecA n=1 Tax=Rhizobium sp. (strain NGR234) RepID=SECA_RHISN similarity UNIREF
DB: UNIREF100
  • Identity: 76.9
  • Coverage: 78.0
  • Bit_score: 115
  • Evalue 2.60e-23
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.0
  • Coverage: 67.0
  • Bit_score: 122
  • Evalue 3.00e-25
secA; preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 78.0
  • Bit_score: 115
  • Evalue 8.20e-24

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 288
ATGGTCAGCCTCGGCGGCATCGCCCGCAAGTTGTTCGGCTCTTCCAACGATCGCCGCGTTCGTTCCTACAAGACCCGCGTCGACGCGATCAACGCGCTCGAGCCCGAGATGAAGGCGCTCTCCGACGAAGCGCTTCGCGCCAAGACCGTGGAATTCCGCGAGCAGCTCGCCGCCGGCAAGACGCTGGACGATCTCCTGGTGCNNNNNNNNNNNNNNNNNNNNNNCGCGAGGCGGCCTTGCGCGTCCTCGGCCTTCGTCCCTTCGACGTCCAGCTCATCGGCGGCATGA
PROTEIN sequence
Length: 96
MVSLGGIARKLFGSSNDRRVRSYKTRVDAINALEPEMKALSDEALRAKTVEFREQLAAGKTLDDLLVXXXXXXXXARRPCASSAFVPSTSSSSAA*