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SCNpilot_expt_1000_bf_scaffold_9976_8

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(6785..7051)

Top 3 Functional Annotations

Value Algorithm Source
Putative 3-phenylpropionic acid transporter HcaT n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CR93_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 88.0
  • Bit_score: 173
  • Evalue 1.30e-40
Putative 3-phenylpropionic acid transporter HcaT {ECO:0000313|EMBL:EYR80069.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 88.0
  • Bit_score: 173
  • Evalue 1.80e-40
transport protein transmembrane similarity KEGG
DB: KEGG
  • Identity: 60.2
  • Coverage: 88.0
  • Bit_score: 109
  • Evalue 4.20e-22

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 267
TACGCGCTGATCCATATGAGCGCGCAGAGCCGGCTCGTGGAGCGCGTGGCGGAGGAGCAGGAGGCGGCGGCGCAGGGGCTCTATTTCTTCTACACCGGCGTCTTCACGGCGCTCGCCACCTTCGTCTCGGGCTATGCCTTCAGCTGGTACGGCGTCCAGGGCTTCTACCTGATGTCGCTCGTTGCCGCTGCCGGCCTTCTCTCGGTCATTGCCGGACGCATCGTCGCGCCGCGTGTTCAGCCCCAGAGCGCGGCCTCGGGCGGATAG
PROTEIN sequence
Length: 89
YALIHMSAQSRLVERVAEEQEAAAQGLYFFYTGVFTALATFVSGYAFSWYGVQGFYLMSLVAAAGLLSVIAGRIVAPRVQPQSAASGG*