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SCNpilot_expt_1000_bf_scaffold_10366_8

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 6023..6214

Top 3 Functional Annotations

Value Algorithm Source
Xylose isomerase domain-containing protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D4H2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 63.0
  • Bit_score: 101
  • Evalue 2.60e-19
Xylose isomerase domain-containing protein {ECO:0000313|EMBL:EYR83553.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 63.0
  • Bit_score: 101
  • Evalue 3.60e-19
putative amino acid isomerase similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 63.0
  • Bit_score: 84
  • Evalue 1.30e-14

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 192
ATGCGCGACGGCCACCGCGTCCTCGTCGGCCCGAAGGATCGCCTCGATAATGCCGGCCAGATCAAGGCCCTCCTGGCCGCCGGCTATGCCGGCCCGCTTTCCTTCGAGCCCTTCTCGCCTTCCGTCCACGACGTCGCGGACCCGAAGGCCGCCGTTGCCGAAAGCGTCGCTTTCCTCAGCGCAAATATCTGA
PROTEIN sequence
Length: 64
MRDGHRVLVGPKDRLDNAGQIKALLAAGYAGPLSFEPFSPSVHDVADPKAAVAESVAFLSANI*