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SCNpilot_expt_1000_bf_scaffold_12816_3

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 2657..3232

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Rhizobium meliloti RepID=UPI00036E4649 similarity UNIREF
DB: UNIREF100
  • Identity: 77.4
  • Coverage: 190.0
  • Bit_score: 319
  • Evalue 1.80e-84
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR79782.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 191.0
  • Bit_score: 334
  • Evalue 1.00e-88
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 190.0
  • Bit_score: 313
  • Evalue 5.30e-83
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
ATGCGTTGCGTATTGATCGTCGTCCTCCTGCTGCTCGCCGGATGTGCGTCCGTCCCCCGACAGACGCAGAATGCCTGCGCCATCTTCGAGCAGCGCGACGGCTACTTCGATAACTGGCGGAAAGCCGCCTATAGCGTGGAGCGCGAATACGGCGTTCCCGTCCCCGTGCTGATGGCGACGGTCTATGCGGAGTCCGGCTTCCGGCACAACGCCCGCCCGCCGCGCACCAAGCTCTTCGGCTTCATTCCCTGGAAGCGCCAGTCGACGGCGCTCGGCTTCTCGCAGGCGCTCGACGGCACCTGGGCGCGCTACAAGCGCGAGACCGGCCGCTGGTCGGCAAGCCGCACCGATTTCCGCGACGCGATCCGCTTCATCGGCTGGNNNNNNNNNNNNNNNNNNNNNNGCCGGAACGGCATCGCCCTCAACGATACCTACCGGCTCTACATCGCCTATTACCACGGCCACACCGGCTACCAGCGCGGCAACTGGAGCGCGACGGCAAGGGCGGGCGCCAAGCGGGCAACGACCATGGCCGGCAACTATGCGCGGCAATTGCAGAGCTGCGGCGGGTGGTAG
PROTEIN sequence
Length: 192
MRCVLIVVLLLLAGCASVPRQTQNACAIFEQRDGYFDNWRKAAYSVEREYGVPVPVLMATVYAESGFRHNARPPRTKLFGFIPWKRQSTALGFSQALDGTWARYKRETGRWSASRTDFRDAIRFIGWXXXXXXXXRNGIALNDTYRLYIAYYHGHTGYQRGNWSATARAGAKRATTMAGNYARQLQSCGGW*