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SCNpilot_expt_1000_bf_scaffold_13054_11

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 5671..6690

Top 3 Functional Annotations

Value Algorithm Source
Putative dehydrogenase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CCI9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.3
  • Coverage: 347.0
  • Bit_score: 617
  • Evalue 7.50e-174
  • rbh
Putative dehydrogenase {ECO:0000313|EMBL:EYR80942.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 347.0
  • Bit_score: 617
  • Evalue 1.00e-173
oxidoreductase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 347.0
  • Bit_score: 554
  • Evalue 2.40e-155
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1020
ATGCGTCTTCTCGTTCTTGGAACAGGCGGCATGGCCAATGCCCATGCCCGGCATTTCGCGGCGATCGAGGGTGTCGAGCTGGTCGGTGCCGTCGATGTCGATCCTTCGCGCGTCAAGGCCTTTGCCGACCTGCATGGCATTCCCGGCGTCTTCACCTCGCTGGAGGAGGCGATCGCCTGGGGCGGCTTCGATGCGGCGACCAACGTGACGCCCGACCGTGCGCATCACCCGACCACGCTGGCGCTGCTGGCGGCGGGCAAGCATGTGATGTGCGAAAAGCCGCTTGCGGAGAACTATGCGAAGGCGGACGAGATGGCGCGCGCGGCCGAAGCCTCCGGCCTCGTCACCATGGTCAACCTGACCTACCGCAACGTGGCGCCGCTGCAGAAGGCGCGCGAGATGGTGCTGGTCGGCACGATCGGCCGGGTGCGCCATGTCGAGGCTTCCTACCTGCAAAGCTGGCTCGTCTCGAAGGCGTGGGGCAACTGGGCGACGGAAAGCCAGTGCGGCTCGAACGGCGTGCTGGGGGATGTCGGCATCCATATCCTCGACTTCGCCAGCTACGGCGCGGCGAGCGACGTGGACCACATATTCGCGCGGCTGAAGGCGTTCGACAAGGCGCCGGACAACCGCATCGGCGAATATGACCTCGACGGGAACGACAGCTTCACCATGACGGTCGATTTCGCCAACGGCGCGCTCGGCGTCATCCATGCCAGCCGCTGGGCGACGGGCCATCTCAACGAACTGCGCCTGCGCATGCATGGCGACAAGGGCGCGCTCGAGGTCATCCATTCGACCGAGGGCTCGAAGCTGCGCGGCTGCCTCGGCGAGGATGTCGAGCAGGCCGTCTGGCGGGATATCGATGCCGGCACGGTGCCGACCAACTACGAGCGCTTCGCGGCTGCCGTTGCGGCGCGCCAGACGATAGAACCCGGCTTCCGCCACGCGGCCGAACTCCAGAAGGTCCTCGATCTCGCCATCGAGACGGAGAGGGGACGCTGCGAGCTGAAGGTCTAG
PROTEIN sequence
Length: 340
MRLLVLGTGGMANAHARHFAAIEGVELVGAVDVDPSRVKAFADLHGIPGVFTSLEEAIAWGGFDAATNVTPDRAHHPTTLALLAAGKHVMCEKPLAENYAKADEMARAAEASGLVTMVNLTYRNVAPLQKAREMVLVGTIGRVRHVEASYLQSWLVSKAWGNWATESQCGSNGVLGDVGIHILDFASYGAASDVDHIFARLKAFDKAPDNRIGEYDLDGNDSFTMTVDFANGALGVIHASRWATGHLNELRLRMHGDKGALEVIHSTEGSKLRGCLGEDVEQAVWRDIDAGTVPTNYERFAAAVAARQTIEPGFRHAAELQKVLDLAIETERGRCELKV*