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SCNpilot_expt_1000_bf_scaffold_13881_6

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 3226..4137

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QGY7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 75.8
  • Coverage: 277.0
  • Bit_score: 411
  • Evalue 5.60e-112
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EKF60341.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.8
  • Coverage: 277.0
  • Bit_score: 411
  • Evalue 7.80e-112
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 277.0
  • Bit_score: 356
  • Evalue 6.70e-96

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Taxonomy

Agrobacterium albertimagni → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGCTCGATCTCGTCCAGCTCCGCAGTTTCGTCATGGTGGCGCAGACGCGGAGCTTCACGCTCTCCGCCGAGCGGCTGGGGCTCGGCCAGTCGACGGTCAGCCAGCATCTCCAGCGGCTGGAGCGCGGGCTCGGCCGGCGGCTCATCGACCGCGACACCCATGCGGTGCGGCTGACCGCGGACGGCGAGGCGCTGCTTCCCCATGCCCGCCAGCTTCTGGCGCTCGAGCGGCAGGCGGCGGGGCAGTTCGCGAAGGAGGCGCCGCGCGGCCCGTTCCGCCTCGGGGTCTCGGAGGACCTGGTGAGCGGGCAGTTGCCCGGCCTGCTGGAGGATTTCATCGCCGACTATCCCTCTGTCGACCTCCAGCTTTCCGTCGCGCTTTCCAAGACGCTCGCCGAGATGCAGGACCGCGGCGAGCTCGACCTCGTCATGGCCAAGCGCCGGATCGGCGAGCGGCGCGGCGATGCGATCCTGCGCGAGCCGCTCGTCTGGCTGGCGAGCGATCCGGAGGCGATGCTGGCCAAGCCGGCGCTGCCGCTCATCGTCTTCCCGCCGCCGAGCCTGACGCGCGTCCTGCTGATGGAGGCGCTGGAGCGCAGCGGAACTGCTTGGCGCATCGTCTGCTCGTGCCAGAGCCTCAGCGGGCTGACGGCCGCCGCGCGCGCCGGCATGGGCGTCCTCGTCCAGCCGCGCAGCCTTGCGCCCGCCGGCCTCAGCGAGATCGCGCCGCCGCTGCTGCCGCCGCTCGACGATGTGGAATTCGTGCTCGTGACGTCGCGCTCGGCCGACCATGCCACCGTCTCGGCCTTCTCCCGCAAGGTGCGGGAGCGCTTCGGCAAGGGCTTTGCCGGTGTCGGGGCGGCCGAGGGCGCGCGGACCGGAGGCGGCCAGCCGCCGCGCGAATTTCCCTAG
PROTEIN sequence
Length: 304
MLDLVQLRSFVMVAQTRSFTLSAERLGLGQSTVSQHLQRLERGLGRRLIDRDTHAVRLTADGEALLPHARQLLALERQAAGQFAKEAPRGPFRLGVSEDLVSGQLPGLLEDFIADYPSVDLQLSVALSKTLAEMQDRGELDLVMAKRRIGERRGDAILREPLVWLASDPEAMLAKPALPLIVFPPPSLTRVLLMEALERSGTAWRIVCSCQSLSGLTAAARAGMGVLVQPRSLAPAGLSEIAPPLLPPLDDVEFVLVTSRSADHATVSAFSRKVRERFGKGFAGVGAAEGARTGGGQPPREFP*