ggKbase home page

SCNpilot_expt_1000_bf_scaffold_20224_10

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 4259..4675

Top 3 Functional Annotations

Value Algorithm Source
chromosome partitioning protein ParA n=1 Tax=Rhizobium mongolense RepID=UPI0003B7B0B7 similarity UNIREF
DB: UNIREF100
  • Identity: 74.8
  • Coverage: 123.0
  • Bit_score: 185
  • Evalue 3.00e-44
Chromosome partitioning protein ParA {ECO:0000313|EMBL:KJF71425.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.7
  • Coverage: 123.0
  • Bit_score: 176
  • Evalue 3.30e-41
repA; putative replication protein A similarity KEGG
DB: KEGG
  • Identity: 60.2
  • Coverage: 118.0
  • Bit_score: 145
  • Evalue 1.10e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Agrobacterium arsenijevicii → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGAATCAGAAGGCTGAAGCTAGTAGTGGACCCTTGACCCTCGTTGAGTTGATCGAGCGGCACTCAAGCGCCCTCGGTGCCCAGTTGCAGGCGCATCATCTCAGTGTATTCCCGCCCGTCGCGAAGAAGAGCATTCGCCATTTTGCACCTTCCGAAGCTGCGAAGCTGATTGGAGTGCGTGAGGTCTATCTCCGTCAAATCTCAAATGACATTGAGGGCCTTGATATTTCGACCACCGCAGGTGGGCGAAGAATGTATTCGATCGAGGATATCGACAAGATTCGCAGGCACCGCGACAAGGTGGGCCGTGCTGATCGCATGTATCTCCCTCATCGTCGCAGTCACGAAGCCCTGCAGATCCTTTCCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTAG
PROTEIN sequence
Length: 139
MNQKAEASSGPLTLVELIERHSSALGAQLQAHHLSVFPPVAKKSIRHFAPSEAAKLIGVREVYLRQISNDIEGLDISTTAGGRRMYSIEDIDKIRRHRDKVGRADRMYLPHRRSHEALQILSXXXXXXXXXXXXXXXX*