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SCNpilot_expt_1000_bf_scaffold_25990_3

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(1540..1992)

Top 3 Functional Annotations

Value Algorithm Source
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 105.0
  • Bit_score: 215
  • Evalue 6.90e-53
isocitrate dehydrogenase; K00031 isocitrate dehydrogenase [EC:1.1.1.42] similarity KEGG
DB: KEGG
  • Identity: 96.2
  • Coverage: 105.0
  • Bit_score: 211
  • Evalue 1.70e-52
isocitrate dehydrogenase n=1 Tax=Rhizobium giardinii RepID=UPI00036C4DC3 similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 105.0
  • Bit_score: 213
  • Evalue 1.10e-52

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Taxonomy

Ensifer adhaerens → Ensifer → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 453
ATGGCAAAGATCAAGGTCGCCAACCCCGTCGTCGAACTCGACGGCGACGAGATGACGCGCATCATCTGGCAGTTCATCAAGGACAAGCTGATCCACCCCTACCTTGATATCGACCTCGAATACTACGACCTCGGCATGGAGAACCGCGACGCCACTGACGACCAGGTGACGATCGACGCCGCCAACGCCATCAAGAAGCACGGCGTCGGCGTCAAGTGCGCCACCATCACGCCGGACGAAGCCCGCGTCGAGGAATTCAAGCTGAAGAAGATGTGGAAGTCGCCGAACGGCACGATCCGCAACATCCTCGGGTCATCTTCCGCGAGCCGATCATCTGCAAGAACGTGCCGCGCCTCGTTCCCGGCTGGACCAAGCCGATCATCGTCGGCCGCCACGCCTTCGGCGACCAGTACCGCGCCACCGACTTCAAGTTCCCCGGCAAGGGCAAGCTGA
PROTEIN sequence
Length: 151
MAKIKVANPVVELDGDEMTRIIWQFIKDKLIHPYLDIDLEYYDLGMENRDATDDQVTIDAANAIKKHGVGVKCATITPDEARVEEFKLKKMWKSPNGTIRNILGSSSASRSSARTCRASFPAGPSRSSSAATPSATSTAPPTSSSPARAS*