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SCNpilot_expt_1000_bf_scaffold_1268_18

Organism: SCNPILOT_EXPT_1000_BF_Rhizobium_63_7

partial RP 36 / 55 MC: 3 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(16233..17423)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF128F related cluster n=1 Tax=unknown RepID=UPI0003CF128F similarity UNIREF
DB: UNIREF100
  • Identity: 89.8
  • Coverage: 392.0
  • Bit_score: 692
  • Evalue 2.80e-196
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESY70048.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 392.0
  • Bit_score: 692
  • Evalue 3.90e-196
ABC-type sugar transport system, ATPase component similarity KEGG
DB: KEGG
  • Identity: 90.1
  • Coverage: 392.0
  • Bit_score: 691
  • Evalue 1.90e-196

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Taxonomy

Mesorhizobium sp. LNHC252B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1191
TTGCCCAGAACCTTCCTGAACCGCCTGCGCGGCACCTATATCTCGGCGCAGCAATTCCTGCAGTCGCTGAATTTCCCGGTCGATCCCACCGCCATGGTCGAGACGCTGGGTGCGGCCAAGAAGCAGATGGTGGAGATCGCCCGCGCCGTCCACCACAATGCCGAGATCATCATCTTCGACGAGCCGACCGCGACGCTGACGCCGGAGGAAAAGCGCCACTTCTTCGCGCTTGTGCGCCGTCTCAAGGCGCGCGGCGTGTCGATCGTCTTCATCTCCCACGCGCTCGAAGAGGCGCTGTTGCTCTCCGATCGCATCACCATCCTGCGCGACGGCGAACTGGTCGCCTCGGGCGAAACGAAGGAATTCGACCGCGAAAAGATCATCGCCGCCATGGTCGGCCGCACGCTCTCGGCCGAACTCTACCGCCAGCGCGACGAGGCGAAGCTGCGCAAGCCCGGCCACAAGGTGCTGTCGGTGCAAGACATCTCGATGAGCAACATCGTGCGCAACAATTCCTTCTCGATCTTCGAGGGCCAGATCACCGGCGTCTTCGGCCTGATCGGCTCCGGCCGCACCGAAACCTTCAAGGTGGTCGCCGGCATCTACAAGCGCGACTTCAACCGCGGCGGCACCATCGAGCTGGACGACAAGCCGGTGCGCTATTACGTGCCGCGCGAAGCAGTGAAGGACGGCATCGTCTACGTCACCGAGGATCGCAAGAGCGAAGGTTTCTTCGAAACCATGTCGATCGCCGAAAACATTTTTGGTGGCCTGCTCGCCGCCGGCCATGAAAAGGCCTGGGTGATCAACGCCGCGGAGATGCGGGCGCTGTCGGCCGAATGGACGAAGATGCTGAACATTCGCGCCATCAACGACAATGCCCGCGTCGTCGAGCTTTCCGGCGGCAACCAGCAGAAGGTGGTGATCGGCAAAGGCCTGGTGCAGCGCCCGCGTGTCGTCATCTTCGACGAACCGACCCGCGGCGTCGATGTCGGCGCCATCGCTGAGATCCACCAGATCATCAACCGGCTCGCCGACGAGGGCCTCGCCGTGGTGGTGATTTCTTCCTACCTGCCGGAGATCATGAACCTCTCCGACCGCATCCTCGTCTGCCGCCAGGGCCGTATCGTCGAGGAGTTTTCCCCCGCCGAGGCGACCGAGGAGAAGATCATGTATGCAGCGGTGCATTGA
PROTEIN sequence
Length: 397
LPRTFLNRLRGTYISAQQFLQSLNFPVDPTAMVETLGAAKKQMVEIARAVHHNAEIIIFDEPTATLTPEEKRHFFALVRRLKARGVSIVFISHALEEALLLSDRITILRDGELVASGETKEFDREKIIAAMVGRTLSAELYRQRDEAKLRKPGHKVLSVQDISMSNIVRNNSFSIFEGQITGVFGLIGSGRTETFKVVAGIYKRDFNRGGTIELDDKPVRYYVPREAVKDGIVYVTEDRKSEGFFETMSIAENIFGGLLAAGHEKAWVINAAEMRALSAEWTKMLNIRAINDNARVVELSGGNQQKVVIGKGLVQRPRVVIFDEPTRGVDVGAIAEIHQIINRLADEGLAVVVISSYLPEIMNLSDRILVCRQGRIVEEFSPAEATEEKIMYAAVH*