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SCNpilot_expt_1000_bf_scaffold_1808_8

Organism: SCNPILOT_EXPT_1000_BF_Rhizobium_63_7

partial RP 36 / 55 MC: 3 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 6903..7931

Top 3 Functional Annotations

Value Algorithm Source
Thiamine ABC transporter, periplasmic binding protein n=1 Tax=Rhizobium sp. CF122 RepID=J2ID81_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 82.8
  • Coverage: 337.0
  • Bit_score: 568
  • Evalue 4.00e-159
Thiamine ABC transporter, periplasmic binding protein {ECO:0000313|EMBL:EJL53980.1}; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.8
  • Coverage: 337.0
  • Bit_score: 568
  • Evalue 5.60e-159
tbpA; thiamine transporter substrate binding subunit; K02064 thiamine transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 79.5
  • Coverage: 342.0
  • Bit_score: 564
  • Evalue 3.10e-158

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Taxonomy

Rhizobium sp. CF122 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1029
ATGCCGATCCAGAAGACTTCGACACTGTTTTCCCTGGCCGCACTCGCCGCCGGGGCGTTTCTTGCTTTTTCCGGCGCAGCCAATGCCGCCGACAAGACGTTGACGATCTACACCTATGAGAGCTTCATCGCCGAATGGGGTCCTGGCCCCAAGGTCAAGGAAGCCTTCGAGAAGACCTGCGCATGCACCGTCGATTTCGTCGGCGTCGCCGATGGCGTGGCACTTCTGTCGCGACTGAAGCTCGAGGGCGAAGGCAGCAAGGCCGACCTGGTGCTTGGCCTCGACACCAACCTCGTCAGCGAAGCCAAGGACACCGGCCTTTTCGAAGACCACGGCATCGATACGACCGCCGTCAAGGTGCCCGGCGACTTCAAGGATGCGGTTTTCGTTCCCTACGACTACGGCCATTTCGCCGTCGTCTACGACACGCAGGCGCTGAAGGCGCCGCCGGCGAGCCTCAAGGAACTGGTCGAGGGCGATCCGTCGCAGAAGATCGTCATCGAGGACCCGCGCACCTCGACCCCCGGCCTCGGCCTGCTGCTCTGGGTCAAATCGGTCTATGGCGACAAGGCGCCGGAAGCCTGGGCCAGGCTCAAGAACCGCGTCCTCACCGTCACGCCCGGCTGGTCGGAGGCCTACGGCCTGTTCACCAAGGGCGAGGCGCCGATGGTGCTCTCCTACACCACCTCGCCGGCCTACCACATGGTGGCGGAAAGCACCGACCGCTATCAGGCGGCCGCCTTTTCCGAAGGCCACTACATCCAGATCGAGGTTGCCGGCCTGTTGAAAAACGCCAAGGACAAGCAACTCGCCAGGGATTTCCTTTCCTTCATGATCGGTCCCGGCTTCCAGGACACCATCCCGACCAACAACTGGATGATGCCGGTCTCGGCCACGTCGCAGCCGCTGCCGGATGCCTTCGGCAAGCTGGTCGTCCCGCAGAAGACCTTCCTGATGTCGCCTGAAGAGGTGGCCAGCAACCGCGCGGCCTGGATCGACGAGTGGCTCGCCGCCATGAGCGCCAACTGA
PROTEIN sequence
Length: 343
MPIQKTSTLFSLAALAAGAFLAFSGAANAADKTLTIYTYESFIAEWGPGPKVKEAFEKTCACTVDFVGVADGVALLSRLKLEGEGSKADLVLGLDTNLVSEAKDTGLFEDHGIDTTAVKVPGDFKDAVFVPYDYGHFAVVYDTQALKAPPASLKELVEGDPSQKIVIEDPRTSTPGLGLLLWVKSVYGDKAPEAWARLKNRVLTVTPGWSEAYGLFTKGEAPMVLSYTTSPAYHMVAESTDRYQAAAFSEGHYIQIEVAGLLKNAKDKQLARDFLSFMIGPGFQDTIPTNNWMMPVSATSQPLPDAFGKLVVPQKTFLMSPEEVASNRAAWIDEWLAAMSAN*