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SCNpilot_expt_1000_bf_scaffold_1934_9

Organism: SCNPILOT_EXPT_1000_BF_Rhizobium_63_7

partial RP 36 / 55 MC: 3 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(6162..7208)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LacI family n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B0W3_PARDP similarity UNIREF
DB: UNIREF100
  • Identity: 50.5
  • Coverage: 327.0
  • Bit_score: 331
  • Evalue 8.40e-88
  • rbh
regulatory protein, LacI; K02529 LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 327.0
  • Bit_score: 331
  • Evalue 2.60e-88
  • rbh
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ABL69157.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.5
  • Coverage: 327.0
  • Bit_score: 331
  • Evalue 1.20e-87

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Taxonomy

Paracoccus denitrificans → Paracoccus → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1047
ATGAAAAGCAAAGGTCAAGGTGGCCGGGGGACGACCGTCCACGACGTGGCGAAGCTCGCAAATGTATCGATCGCCACTGTTTCCCGGGTCCTAAACAAGCCGGATACCGTCAACAAGGAGATGTCCGAGAGAGTGCTGCAGGCGGCGGCGCAGCTTGGCTATACGACGAATTCCGCCGGCAAGGCTTTGCGGCTGGCGCGGACCCGCACCATCGGCACGCTTCTGCCCCGACTCGACGATCCGATTTTCTCGGAATTGGCGCACGGCATACAAGAAACGCTTTTCGCGCAAGATTATGCCGGTTTTCTTCAGACATCCGGTTATGACAATACAAAAATCTTCGATGCCGCCTTGCGGTTATTCAATCGCGGCGCCGAAGGCTTGCTTGTATTCGGTCGCGTTGAGGACGACCGTCTTCTGGAATTTATTGCGAAAAACCCCATTCCCGTCCTGCAGGTCTATTCCTATCTCGAAGGCCATCCCCTGCCCTCGGTCGGCATAGACAACGCCCGGTGCACCCGCAAGGTTGCCGAACTCATGCTGCAGTTCGGTCATACGCATGTCGCCCTTATCTCCGGCCCCACCCGGGGCAACGACAGGCAGCAGTCACGCCTGGATGCTTACGAAAAGATCATGCGCGACCACGGGCTGGAGACGGTGGTGCAGATCGTTCAGCCCGGCTACACGATCAATGACGGCGGCATGGCTTTCCGCAGGATTATGGAGCAAAATCCAAAAGTTACGTCCGTGATGTGCAATACGGACCTGCTGGCTTGCGGCGTGCTTTCGGAATGCCGCAAGCTGGGGATCGAGGTGCCGAAACAGCTTTCGGTCAGCGGTTTCGAAGACGTCAGTTTTGCCCCCTTGCTCTACCAGCCGCTGACCACGCTATCGGTCCCCGCAGGCGATATCGGGCGCCACGCGGCCCGGGCGATGATCGCCAATCTCGAACATGGCGAGAGCCTCACATCAATGCAGTTCGAGGCGAGCCTGATCCTGCGTGATTCCGTTGCGGCAGCCCCGAAGGCATCCGGCCGGGCGGCGTGA
PROTEIN sequence
Length: 349
MKSKGQGGRGTTVHDVAKLANVSIATVSRVLNKPDTVNKEMSERVLQAAAQLGYTTNSAGKALRLARTRTIGTLLPRLDDPIFSELAHGIQETLFAQDYAGFLQTSGYDNTKIFDAALRLFNRGAEGLLVFGRVEDDRLLEFIAKNPIPVLQVYSYLEGHPLPSVGIDNARCTRKVAELMLQFGHTHVALISGPTRGNDRQQSRLDAYEKIMRDHGLETVVQIVQPGYTINDGGMAFRRIMEQNPKVTSVMCNTDLLACGVLSECRKLGIEVPKQLSVSGFEDVSFAPLLYQPLTTLSVPAGDIGRHAARAMIANLEHGESLTSMQFEASLILRDSVAAAPKASGRAA*