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SCNpilot_expt_1000_bf_scaffold_1934_22

Organism: SCNPILOT_EXPT_1000_BF_Rhizobium_63_7

partial RP 36 / 55 MC: 3 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 22115..24136

Top 3 Functional Annotations

Value Algorithm Source
Glycine betaine/L-proline transport system permease protein ProW n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PG63_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 664.0
  • Bit_score: 1008
  • Evalue 2.30e-291
  • rbh
Glycine betaine transport system permease protein OpuAB {ECO:0000313|EMBL:EYR78312.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 660.0
  • Bit_score: 1027
  • Evalue 0.0
proW; glycine betaine/L-proline transport system permease protein ProW; K02001 glycine betaine/proline transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 58.6
  • Coverage: 631.0
  • Bit_score: 732
  • Evalue 9.90e-209
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2022
ATGACGCACGCACCAACCGACCGCATCGATGTTCACGACACCGCTCTTCCCAGCAGCACGGGCACGCGTGACGCCTTGGTCTTCGGCGGTGCCTTGGCTCTGCTGATGATCGTCTGGCAGATCGGTCCCGGCCTGGCGAAATGGGCTTTCGATTATCCCAAGGCGTGGCAGATCCCCGCCGCGCGCCATATCGGCCGCTGGACGAAATGGCTGCTGGACGACGCCACATTCGGCCTCTTCACCTTCACGGATCTCACCCGCTTCATCGCCGCCGTCATCGATGTTCCTTACCGGCTGGCGCTCAGCCTGCTTGCGACCGGCTTCCTCTCCGGGCAGGGATCGAGCGCCGTGCAGGTGTTTCCGCCGCTCTCCTATATCGCCGTGCTGCTGCTGGTGACGCTGGCGGGCTATTATGCCGGCGGGCGGCGGCTTGCTGTCCTGGTCGCCGCCTGCTTCGGCTTCCTGATCGTCTTCGGCCAGTGGACCAGCGCCATGGTGACGCTGGCCTCCATCCTCGTCGCCGTGCCGATCGGCGTCGTGCTCGGTCTGCTGCTTGGGCTCGGCGCCTATCGCTGGCCGCTGTTCGAGAAGGCGCTGACGCCGCTGCTCGACCTGATGCAGACCATCCCGGTTTTCGCCTATCTGGTGCCGATCCTGTTCTTCTTCGGGTTCGGCCCGACGGCGGCGATCGTCGCGACGCTGATCTACGCCCTGCCGCCGATGGCGCGCATCACCGTGCTCGGCCTGCGCTCCGTGCCTTCGGAAATCCGCGATCTCGGCCATATGGTCGGCTGCTCGCGCCGGCAGATGACCTGGAAGATCATGGTGCCGTCGGCCGCCGACGCGCTGATGGTCGGCGTCAACCAGGTGATCATGCTGTCGCTGAACATGGTGATCATCGCCTCGATGATCGGCGCCGGCGGCCTGGGTTTCGATGTGCTGGGCGCCCTGCGCCGCCTCGATATCGGCGCCGGGCTGGAGGCCGGCTTCGCCATCGTCGCCCTCGCCGTCGCCCTTGACCGGCTGAGCCAAGCGCTGGCGCAAAAGACCGGCGCGCCGTTGCCTGTCGGGAAACGTACATCGATTGCCGCCCGCCATCCCTATCTCGTCGCCAGCCTCGCCATCATCGTCGTCGGCTTCGTGCTCGGGCTTCTCCTCCCGGCGCTGCAGACCTTTCCGGAAGCATGGACGCTCTCCACCGGCGGCTTCTGGAACGAGGTGGTGCGCTGGATCAACGTCAATTTCTTCGACGCGCTGGAAGCCCTGCGCAATCTCGTCCTGCTCAACGTGCTGGTGCCGTTCAAGCGTTTTCTCGGCGAACTGCCCTGGCTCGGTGTCGTGCTTTTGCTGGCGCTTGCCGGCTACCGCCTCGGCGGGCTTCGGCTGGCGCTGACGGCTGGCGTGCTCTCCTTCCTGATCGCAGCCACCGGACAGTGGGAAAAGGCGATGGTCACCGTCTATCTCTGCGGCATTTCGGTGATCGTCGCCAGCCTGATCGGCATTCCGCTCGGCATCCTGGCTTCCGAGCGCGATCGGTTGTGGCGTTGGCTGCAGGTGGTCATCGACACGCTGCAGACCCTGCCCTCCTTCGTCTACCTGATGCCGGTCGTCATGCTGTTCCGGGTGGGCGATTTCACCGCTATGATCGCCATCGTCGCCTACGCCGTCGCGCCGGCGATCCGCTATACGGTGCTCGGGCTGCAGCGGGTCGATCCGCAGGTGGTCGAGGCCGGGCGCGCCATGGGCTGCACGCCACGGCAGATCCTGATGAAGATCAAGCTCCGGCTGGCGCTGCCGGAAATCCTGCTCGGCCTCAACCAGACGATCATGTTCGCCCTGTCGATGCTAGTGATCACCGCGCTCGTCGGCACCCGCGATCTCGGCCAGGAGGTCTACATCGCGCTCACAAAGGCGGATACCGGGCGCGGCATCGTCGCCGGCCTGGCCGTCGCCTTCATCGCCATCATCGCCGACCGGCTGATTTCGGCGGGTGCCGCCCGCATGAAGGAGAGAATGGCATGA
PROTEIN sequence
Length: 674
MTHAPTDRIDVHDTALPSSTGTRDALVFGGALALLMIVWQIGPGLAKWAFDYPKAWQIPAARHIGRWTKWLLDDATFGLFTFTDLTRFIAAVIDVPYRLALSLLATGFLSGQGSSAVQVFPPLSYIAVLLLVTLAGYYAGGRRLAVLVAACFGFLIVFGQWTSAMVTLASILVAVPIGVVLGLLLGLGAYRWPLFEKALTPLLDLMQTIPVFAYLVPILFFFGFGPTAAIVATLIYALPPMARITVLGLRSVPSEIRDLGHMVGCSRRQMTWKIMVPSAADALMVGVNQVIMLSLNMVIIASMIGAGGLGFDVLGALRRLDIGAGLEAGFAIVALAVALDRLSQALAQKTGAPLPVGKRTSIAARHPYLVASLAIIVVGFVLGLLLPALQTFPEAWTLSTGGFWNEVVRWINVNFFDALEALRNLVLLNVLVPFKRFLGELPWLGVVLLLALAGYRLGGLRLALTAGVLSFLIAATGQWEKAMVTVYLCGISVIVASLIGIPLGILASERDRLWRWLQVVIDTLQTLPSFVYLMPVVMLFRVGDFTAMIAIVAYAVAPAIRYTVLGLQRVDPQVVEAGRAMGCTPRQILMKIKLRLALPEILLGLNQTIMFALSMLVITALVGTRDLGQEVYIALTKADTGRGIVAGLAVAFIAIIADRLISAGAARMKERMA*