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SCNpilot_expt_1000_bf_scaffold_3478_7

Organism: SCNPILOT_EXPT_1000_BF_Rhizobium_63_7

partial RP 36 / 55 MC: 3 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 4496..5098

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Rhizobium sp. CF122 RepID=J2RBL5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 53.8
  • Coverage: 195.0
  • Bit_score: 203
  • Evalue 1.50e-49
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EUC01133.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.0
  • Coverage: 200.0
  • Bit_score: 228
  • Evalue 1.10e-56
TetR family transcriptional regulator protein similarity KEGG
DB: KEGG
  • Identity: 51.5
  • Coverage: 196.0
  • Bit_score: 195
  • Evalue 1.70e-47

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Taxonomy

Rhizobium sp. CF080 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGCGCAAACCGCGGCGGAAGGCTGAGGAGACCCGTGAGGATATCCTGTTGAAGGCGGAAGAACTGTTTCGCGCCGACGGTTTTTCCAAGGTTTCGATTGCCGATATCGCCGCAGCGCTTGGCATGTCCCCGGCCAATGTCTTCAAGCACTACCATAGCAAGACGGCGCTCGCCGTCGCTATCACCGAGCGCCATATCAGCCGCATGTCGGCCCGCCTGGAGAGCCTGGACGACACCGTGCAGGTCTCCGAACGGCTGCTGAAAGTGGCGCAGCGGCTGATGGAAAGCCACCTGGATGATCTGCGCTGCAGCCCCTACATCTTCGAAATGGTGCTGATGACGGCCGATACGGATTTTCCGAGCGGGCGCCTTTACAAGCAGTTGCTGGAAGAAAAATTCGAGGCGATCATCCGCGCCGGTATCGAGGCCGGCATCTATCATTGCCCCGATCCCGCACGAACGGCAAAGGCTGTCAGCGCCGCCCTCGCAAGCGTCCTGCATCCGGTTTTCCTCGTCCGCTCACGGCCGGGAGAACTGCCGGAGCGGTGCGAAGTCGTGGTCGAACTCATTAATGCTGCGCTGCAAAACCCTCTTGATAAGTGA
PROTEIN sequence
Length: 201
MRKPRRKAEETREDILLKAEELFRADGFSKVSIADIAAALGMSPANVFKHYHSKTALAVAITERHISRMSARLESLDDTVQVSERLLKVAQRLMESHLDDLRCSPYIFEMVLMTADTDFPSGRLYKQLLEEKFEAIIRAGIEAGIYHCPDPARTAKAVSAALASVLHPVFLVRSRPGELPERCEVVVELINAALQNPLDK*