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SCNpilot_expt_1000_bf_scaffold_3478_15

Organism: SCNPILOT_EXPT_1000_BF_Rhizobium_63_7

partial RP 36 / 55 MC: 3 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(14202..15158)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Rhizobium sp. AP16 RepID=J2D9D0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 75.3
  • Coverage: 316.0
  • Bit_score: 460
  • Evalue 1.10e-126
  • rbh
Peptide ABC transporter {ECO:0000313|EMBL:KAJ36805.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.5
  • Coverage: 313.0
  • Bit_score: 461
  • Evalue 1.20e-126
dipeptide ABC transporter; K02033 peptide/nickel transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 75.3
  • Coverage: 316.0
  • Bit_score: 460
  • Evalue 4.50e-127
  • rbh

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 957
ATGATCATCCTGATGGTGCGCCGGTTCGTCGGGCTGCTGCTGACGCTTCTCGCCGTCTCGACGCTGATATTCCTGGTGATGGCGCTGCTGCCGGGCGATCCGGCGGCAATCATGCTCGGCACCTCGGCCAGCGCCGATACACTGGCCGCGCTGCGGCAACAGCTCGGCCTCGATCAACCGCTGCTGCTACGGTATCTGCAGTGGCTCGGCGGCGTGCTGCAAGGCGATCTCGGCCAGTCGCATACCTATGGCGTGCCCGTCGCCGGATTGATCATCGAAAGACTGGCCGTGACCCTGCCGCTCGCGGCAATGGCGATCCTGCTGTCCGTGCTCATCGCCTTGCCGCTCGGCGTAACCGCCGCGGCGAAGCGCAACGGCCTGGTCGACCTTGCCGCCACGCTGTTTGCGCAGGCCGGCATTGCCGTACCGGCATTCTGGATGGGGCTGCTTTTGATCCTCCTGTTTTCCATGCAGCTCGGCTGGACGCCGGCCGGTGGTTTTCCCGGCTGGCGTGCCGGTTCTTTTGCGGCCGTGCACGCTTTGCTCCTGCCGGCGCTGGCGCTGGCGCTGCCGCAGGCAAGCGTGCTCACCCGCGTCACCCGAACGGCCGTGCTGGATGTTCTCGACGAAGATTTCGTGCGGGCGGCAAGGGCGAAGGGGCTTTCGCGCCGCGCTGCGCTGTGGCGGCATGCCGTTCCCAATGCCATGGTCCCGGTGGTGACCATGCTCGGGCTGCAATTCACCTTCCTGGTCGCCGGCGCGGTGCTGATCGAAAACGTCTTCAACCTGCCGGGTCTCGGGCGGCTCGCCTATCAGGCATTGTCGCAACGGGACATCGTCGTGATGCAGGACGTCGTGCTGTTCTTCGCCGCCCTGGTCATCGTGGTGAATTTCCTGGTGGATCTCTCCTATCTCTGGCTCGATCCGCGCCTGCGCAGCGAAAAGGCGTTTTCATGA
PROTEIN sequence
Length: 319
MIILMVRRFVGLLLTLLAVSTLIFLVMALLPGDPAAIMLGTSASADTLAALRQQLGLDQPLLLRYLQWLGGVLQGDLGQSHTYGVPVAGLIIERLAVTLPLAAMAILLSVLIALPLGVTAAAKRNGLVDLAATLFAQAGIAVPAFWMGLLLILLFSMQLGWTPAGGFPGWRAGSFAAVHALLLPALALALPQASVLTRVTRTAVLDVLDEDFVRAARAKGLSRRAALWRHAVPNAMVPVVTMLGLQFTFLVAGAVLIENVFNLPGLGRLAYQALSQRDIVVMQDVVLFFAALVIVVNFLVDLSYLWLDPRLRSEKAFS*