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SCNpilot_expt_1000_bf_scaffold_3127_10

Organism: SCNPILOT_EXPT_1000_BF_Rhizobium_63_7

partial RP 36 / 55 MC: 3 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 10046..10348

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein assembly factor BamD n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JH41_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 76.5
  • Coverage: 81.0
  • Bit_score: 131
  • Evalue 3.70e-28
hypothetical protein; K05807 putative lipoprotein similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 81.0
  • Bit_score: 131
  • Evalue 1.20e-28
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.5
  • Coverage: 81.0
  • Bit_score: 131
  • Evalue 5.20e-28

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 303
ATGATGAAGAAGACGGCAAGAATGGTATGCGTTTCCTTGCTGCTCGCGGGGACGGCTGCCTTCATTTCCGGTTGCCAGACCGACCCCGATATCGACATCACCAAGCTCGGCGTCGAGAGCGATCCGCCGGAGACCCTTTACAATCAGGGTCTCGCCAACCTGCGCGCCGGCAATACGGCTGAAGCGGGCCGCAAGTTCGATGCCATCGACCAGCAACATCCCTTCACCGACTGGGCGCGCAAGGCGTCAAGCACCGCCAGGGCAAGTATGACGAGGCGATCGCCACCGGCAATCGCTATATGA
PROTEIN sequence
Length: 101
MMKKTARMVCVSLLLAGTAAFISGCQTDPDIDITKLGVESDPPETLYNQGLANLRAGNTAEAGRKFDAIDQQHPFTDWARKASSTARASMTRRSPPAIAI*