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SCNpilot_expt_1000_bf_scaffold_3127_16

Organism: SCNPILOT_EXPT_1000_BF_Rhizobium_63_7

partial RP 36 / 55 MC: 3 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(16676..18637)

Top 3 Functional Annotations

Value Algorithm Source
Methyl-accepting chemotaxis protein n=1 Tax=Rhizobium sp. CF080 RepID=J3BA92_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 58.6
  • Coverage: 655.0
  • Bit_score: 726
  • Evalue 2.90e-206
  • rbh
Methyl-accepting chemotaxis protein McpU {ECO:0000313|EMBL:CDN48333.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.8
  • Coverage: 655.0
  • Bit_score: 727
  • Evalue 2.40e-206
mcpW; methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein similarity KEGG
DB: KEGG
  • Identity: 59.0
  • Coverage: 654.0
  • Bit_score: 713
  • Evalue 6.00e-203

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Taxonomy

Neorhizobium galegae → Neorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1962
ATGACGTCCAGGCAGGTTAGAAAGTCCCTTTCGGTGCGGCAGCGGCTTCTGACGTTGTCCGGCGCCTCCCTCCTCGGCTTCGGCGCCGTGATCGCCGTCGGCTGGAGCGAAAACGGCATCGTAAACGCCGCGCTCGACCGCGCCACCGCGACCCAGCACGATATCGACCGTGTCACCGAGATGCGCATCGCCAATCTGGATCTCGTGCTGACGGCGATGGATACCATCATCGATCGTGACGATCGCGCGATTTCGCTCGACCGCGCCGAGATCATCGCGAGATCCCTGCAAACCCTGCGCGAGGGCGCCGGCGAGATGCGGGCGGTGGCCAAGGAAATCGGCCAGCCGGATCTCGTCTCGTCCTTCGATTCCGATGTCAGTGAACTGCAGGCGAGCATCGCGGTCGAACTGAAGCGCATGGTCGAGACCGGCGCGCCGGCGCAAGATTATGCAAAGCTGGACGACGTGGTCGATGGCGCCGGTGCGCGCATCACGGCGATGCTGCAGATGCTTTGCGTCGAAGGCCGCAAGATTGTCGACCGGCGCGTGGCCGAGGCGACGGCGATATCGTCGCAATCGCTCGCCATCCAGATCGGCTGCGGACTTTTAGCGCTTCTGTCGGTCATAGGCCTGCAAGCCTGGCATGGCGGCCGGTTGCGGCGCGGGATCCAGGGCGTTCGCGACAGCATGCGGAATATCATCGCCGGCGATTACCAATCGCCGGTCGCGGAAATCGAGGCCGGCGACGAAATCGGCGACATGGCGCGCGCGACGGAACTGTTCCGCCGCGCCGCCCTCGAAAAGCGCGACCTCGAAACGAAAAGCCAGGCCGAACAAAGCGAACGCGAACGCGAGCGCCTGGGCCGCGAAGCTGAAAAGGCCGCCGAACACCGCGACGTTCACGCCGCCGTCGAGGCGCTGGCCGGCGGTCTGACCCGCCTGTCGGACGGCGATATCTCCGTGCGCCTCGAGCGACCGTTCCGCGCCGATCTCGAACAGTTGCGTCTCGATTTCAACCGCACCACCGAAAAGCTCAGCGACGTGCTGGTGCAGATCCGCGAAAATGGCTCCTCGATCGAGGCCAACAGCCGCCAGATGCGCGCGTCGGCCGACGACCTCGCCCGTCGCACCGAGCAGCAGGCGGCCTCGCTGGAAGAAACCTCCGCCGCGCTGGAGGAAATTACCGCCACCGTCCGCTCCACCACGACCCGCGCCGAAGAGGCGAGCCTGATGGTCGACGACACCCGCGCCCGCACCGATCGGGGCGGGCGCGTCGTCGGCGACGCCATGGAGGCGATGGAGCGCATCGAGCGCGCCTCCAGCGAGATCGGCACGATCATCAACGTCATCGACGAAATCGCCTTCCAGACCAATCTCCTGGCGCTGAATGCCGGGGTCGAGGCGGCGCGTGCCGGCGAAGCCGGCAAGGGTTTCGCCGTCGTTGCGCAGGAGGTGCGTGAGCTTGCCGGCCGCACCGCCAACGCCGCCAAGGACGTCAAGCATCTGGTTTCGAAATCCAGCGCCGAGGTGAAGACCGGCGTCGATCTGGTGACCGCCACCGGCGATGCGCTGCGCCAGATCGACGACGACGTGCTGCGCATCAACGATCACGTCAAGGCGATCGTCACCTCCGCCCGCGAGCAATCGGTCGGGCTCACCGAGATCAACAGCGCCGTCGGCCAGATGGACCAGGCGACGCAGAAGAACGCGGCCATGGTCGAGGAAACCAATGCCGCGAGCCACGCTCTGGCCAGCGACGCCGAAAACCTGTCGCAACTGGTCGGCCAGTTCCAGATCCGCGACGGCGCCCGCGCCGTTCGCGCCCCGCAGGCGGCAAGCGCCGCCTCGCGTCCAGCACCGTCGCCCGCAAGACGCCTCGCCGGCAAGCTTGCGGAGGCATTCACATCCGGCAGTGCCGTTTCGAGGACGGCCGCCGCTAGCGAAGAGTGGGAAGAATTTTGA
PROTEIN sequence
Length: 654
MTSRQVRKSLSVRQRLLTLSGASLLGFGAVIAVGWSENGIVNAALDRATATQHDIDRVTEMRIANLDLVLTAMDTIIDRDDRAISLDRAEIIARSLQTLREGAGEMRAVAKEIGQPDLVSSFDSDVSELQASIAVELKRMVETGAPAQDYAKLDDVVDGAGARITAMLQMLCVEGRKIVDRRVAEATAISSQSLAIQIGCGLLALLSVIGLQAWHGGRLRRGIQGVRDSMRNIIAGDYQSPVAEIEAGDEIGDMARATELFRRAALEKRDLETKSQAEQSERERERLGREAEKAAEHRDVHAAVEALAGGLTRLSDGDISVRLERPFRADLEQLRLDFNRTTEKLSDVLVQIRENGSSIEANSRQMRASADDLARRTEQQAASLEETSAALEEITATVRSTTTRAEEASLMVDDTRARTDRGGRVVGDAMEAMERIERASSEIGTIINVIDEIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEVRELAGRTANAAKDVKHLVSKSSAEVKTGVDLVTATGDALRQIDDDVLRINDHVKAIVTSAREQSVGLTEINSAVGQMDQATQKNAAMVEETNAASHALASDAENLSQLVGQFQIRDGARAVRAPQAASAASRPAPSPARRLAGKLAEAFTSGSAVSRTAAASEEWEEF*