ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3127_25

Organism: SCNPILOT_EXPT_1000_BF_Rhizobium_63_7

partial RP 36 / 55 MC: 3 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(26363..26989)

Top 3 Functional Annotations

Value Algorithm Source
pncA; nicotinamidase/pyrazinamidase (EC:3.5.1.19 3.5.1.-) similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 206.0
  • Bit_score: 336
  • Evalue 8.40e-90
  • rbh
Nicotinamidase-like amidase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VQV1_RHILT similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 208.0
  • Bit_score: 341
  • Evalue 6.30e-91
  • rbh
PncA {ECO:0000313|EMBL:KJF73924.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 206.0
  • Bit_score: 342
  • Evalue 4.00e-91

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Agrobacterium arsenijevicii → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGAAAACCCTGCTGCTCATCGACATCCAGAACGGTTTCTGCCCCGGCGGCAACCTTGCCGTCGCGGAGGGCGACCAGGTGGTGCCTGTCGCCAACAGCCTGATCGACAGCGGCCGCTACGACCTGATCGTCGCCTCGCAGGACTGGCACCCGGCCGGCCATGGCAGTTTCGCCTCCGCCCATCCGGGCAAGGCGCCGTTCGACATGGGCGAACTGTCCGGCAAGCCGCAGCTGATGTGGCCGGATCATTGCGTCCAGGGCACCCGCGATGCCGAGTTCCATCCTGGCCTGAAAACCTCGGCCATCGACCATGTGCAGCAGAAGGGCCAGAACCCGGCCGTCGACAGCTACTCTGCCTTCCGCGACAACGACCAGGCGGCCCTCACCGGCCTTGCCGGTTACCTGCGCGGCAAGGGCGTGACGGAGCTGGATATCTGCGGCCTTGCGACCGACTATTGCGTCAGGTTTTCGGCGCTCGATGCGGTGGACATGCTGCCCGGCGTCAAGATCCGCTTCATAGAGGATGCAAGCCGCGGCATCACCGCCGAGGGCGTCGCGGACGCCATTGCCGACATGCGCAACAGCGGCGTCGAGATCACCGACAGCAAGGCCGTGCTCGCCGCGTAA
PROTEIN sequence
Length: 209
MKTLLLIDIQNGFCPGGNLAVAEGDQVVPVANSLIDSGRYDLIVASQDWHPAGHGSFASAHPGKAPFDMGELSGKPQLMWPDHCVQGTRDAEFHPGLKTSAIDHVQQKGQNPAVDSYSAFRDNDQAALTGLAGYLRGKGVTELDICGLATDYCVRFSALDAVDMLPGVKIRFIEDASRGITAEGVADAIADMRNSGVEITDSKAVLAA*