ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3760_9

Organism: SCNPILOT_EXPT_1000_BF_Rhizobium_63_7

partial RP 36 / 55 MC: 3 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(6818..7228)

Top 3 Functional Annotations

Value Algorithm Source
UspA domain-containing protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F9B4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 65.4
  • Coverage: 136.0
  • Bit_score: 185
  • Evalue 2.90e-44
UspA domain-containing protein {ECO:0000313|EMBL:EHS50634.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.4
  • Coverage: 136.0
  • Bit_score: 185
  • Evalue 4.10e-44
uspA; universal stress protein similarity KEGG
DB: KEGG
  • Identity: 63.2
  • Coverage: 136.0
  • Bit_score: 178
  • Evalue 1.90e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. PDO1-076 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 411
ATGTACAAGAAAATCCTGGTGCCGGTGGATGTCAGCGTTCTTGAGCGCGGCGAAAAGATCCTGCGGCTGGCATCGACGCTGGTGGAGGCCGGCGGCGACGTCGTCCTGCTTGGTGTCGTCGAGGGCCTGCCGAGCTACCTGACCATCGACATTCCGGTACAGCTCATCGAAGCCGGCATCCGCGAGGTCAAGGAAAAGCTGACGCTTCTCCAGGAAAAGACGGCCGTCTCCGCGCGCATCGAGGTACGCTGCGGCGCGCCGGCGACGGAAATCCTCGCCGCCGCCAAGGAACATGGCGCCGACCTGATCGTCATCGCCTCGCACACGCCCGATTTCACCAATTATTTCATCGGCGCCACGGCCGACAGGGTGGTGCGCCATGCCACCTGCTCGGTACTGGTCGACCGATAG
PROTEIN sequence
Length: 137
MYKKILVPVDVSVLERGEKILRLASTLVEAGGDVVLLGVVEGLPSYLTIDIPVQLIEAGIREVKEKLTLLQEKTAVSARIEVRCGAPATEILAAAKEHGADLIVIASHTPDFTNYFIGATADRVVRHATCSVLVDR*