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SCNpilot_expt_1000_bf_scaffold_8101_12

Organism: SCNPILOT_EXPT_1000_BF_Rhizobium_63_7

partial RP 36 / 55 MC: 3 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 12424..14598

Top 3 Functional Annotations

Value Algorithm Source
Probable outer membrane protein, TonB-dependent receptor n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6NAX1_RHOPA similarity UNIREF
DB: UNIREF100
  • Identity: 52.6
  • Coverage: 728.0
  • Bit_score: 757
  • Evalue 1.70e-215
  • rbh
outer membrane protein TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 728.0
  • Bit_score: 757
  • Evalue 5.30e-216
  • rbh
Probable outer membrane protein, TonB-dependent receptor {ECO:0000313|EMBL:CAE26502.1}; Flags: Precursor;; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.6
  • Coverage: 728.0
  • Bit_score: 757
  • Evalue 2.40e-215

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2175
ATGAAGACTGCTATCGGCTTTGCCGTGCTTCTGGCTGGCGTCAGCCAGCCTGTTCTCGTTCGGGCGCAGGAGGCTGCCGGCGAAACGGTTCTGAAACCGATTCTCGTAACGGCGGAAAAACGCACGTCCGAAAGCAAGGACGTGCCGGCCAGCATTGTGGTGAAGACGGGCGAAGCGCTGTCCCTGCGCAAGACGAAGCGTCGCGACGATGCGATCGCCGCCGAGCCGAATGCCCAGACGGGTGCGGTCACGGCAAAGCTCTATACGTCCTTCACGGCCATCCGCGGCGTCGGCTCCGCCCTCATCGAAAGCGACCCCTCGGTCGGCATCTATGTCGATGGCGTCGGTATCGGCAATGCCCAGGCGCATAGCGGCACGCTGCTCGATGTCCACCGCATCGAAATTTTGCGCGGGCCGCAGGGAACGCTTTATGGCCGCAACAATATTGCCGGCTCGGTCAATATCATCTCCAACCTTCCCGATCCCGACTTTACCGGCGGAGAGGTGGGGGTGGATTTCAGCCGTTTCGGCACGCTGGGCACCACGGCTATCTTCAACACGCCGATCGGGGAGAGTGGCTGGGCGGCGCGCGGAGCCTTGTCGGCCTCGAAAACGGACGGTTTTCTTCACTCGACAGTGGATGGTAGGGATCTTGGCGGCGGCAAGGATATACATGGCCGCTTCAGCGTCGCCGGCGATATCACCGACAATCTCGAATTCCTCGGCATCGTGGATGTCGAGCATCAGGTGCTGGACGGCGAGATGTTCGGCATGTCGGAGGCGGATTTCCTGAGGGGCCGGCGCGGCGTTGCGGTCGATGATCCGACACGTATCGACAGCGACCTCGCCACCGTCTCGGGCCAGTTGACCTACCGGCTCGACAATGGCGACAGCATCGTTTCGATCACCGGCTTCCAGAAAAGTGCGGTGGGCGTGAAAGGAAACGGCTTTCCGCTCGGCTATTTCGCTGCCTATGACGGGCTGTTCCAATCCTTCGGTTTCCCGGATTTCCGCTACCGCGCGGAAAATCCGTTCGACAGCGATTATCGCCAGTGGTCGCAGGAGCTACGCTACGTTTCGGAAGACAACGAACGTTTCAACTGGGTCGCCGGCCTCTATGGCGAGTTCTCCGAGGCCTCGCGTATCTACGGTGCGAACAGCACCTTCACGGGTGGCGAGGCGACGCTTTCGACCCGCGGCGACACGGATACGGTTTCGCTTTCCGTCTTCGCGGACGGCACCTACGCGCTCAACGACCAGTGGAAGCTTTACGGCGGCCTGCGCGTCGGCCATGACCGCAAGACCTTCGACTACGATTTCACGGCCAATACCGCCGCCCAGCTTCTCGGCCTTACGGGAACCTTCGCACCAGGTTACAACGCGAAGCTTTCCGAAACCTACGTCACGCCGCGTCTCGGCCTGCAGTTCGAGCCGATGGAGGGGCTGAACCTCTATGGTGGCGTTTCCAGCGGCTACAAGTCGGGCGGCTTCAATTCCGGCTTCGTCGGCCTGGGCGACGAGGGCGCCTACGATTCGGAGCGTGTCGTCAGCTACGAGCTCGGCCTGAAATCGGCAACGCTCGACGACCGGCTCAAGGTGGAGGCGTCGGTTTTCTATATCGATTGGCGCGACCAGCAGGTTCAGGGTTTTAATGCGCTGACAGGCACAACGCCGATTTCCAACGCGTCGCGCAGCGAGTCCTGGGGCGGCGAACTGTCCGTTGCCTATGACGTGGACGATCACTGGTCGCTGATGGCCGCCGCCGGTTATGCGGATGCGACCTACAAGGACTTTCGCAACGCCCGCGCGCTCGACGGTTCCGGCACGGTCGATGTCAGCGGCAACCAGCAGCAATTCGTTTCGCGCTTCACCGGTTCGGCGGGCCTCGCCTACCAGTGGGAGACCGGATGGCACGATCTCGTCGGCAAGGTCGGCGTGAACTACCGCTATCGCTCAAGCTATTATTTCGATGTCCAGAACACGATCCGCCAGAAGGGTTATGGTCTCCTGGACGCCTATGCCGGCCTGGAGAACGACCGTTATGCGGCCTATCTCTTCGCCAAGAATATCGGTGATGTCGACTATCGCATCGTCGCCGCCGATCTCGGCACCGGTAGGCTGGTCTCGCCCGGAGACCCGTTGACCTTCGGCGGCAGCTTCAAGGTCAAGTTCTGA
PROTEIN sequence
Length: 725
MKTAIGFAVLLAGVSQPVLVRAQEAAGETVLKPILVTAEKRTSESKDVPASIVVKTGEALSLRKTKRRDDAIAAEPNAQTGAVTAKLYTSFTAIRGVGSALIESDPSVGIYVDGVGIGNAQAHSGTLLDVHRIEILRGPQGTLYGRNNIAGSVNIISNLPDPDFTGGEVGVDFSRFGTLGTTAIFNTPIGESGWAARGALSASKTDGFLHSTVDGRDLGGGKDIHGRFSVAGDITDNLEFLGIVDVEHQVLDGEMFGMSEADFLRGRRGVAVDDPTRIDSDLATVSGQLTYRLDNGDSIVSITGFQKSAVGVKGNGFPLGYFAAYDGLFQSFGFPDFRYRAENPFDSDYRQWSQELRYVSEDNERFNWVAGLYGEFSEASRIYGANSTFTGGEATLSTRGDTDTVSLSVFADGTYALNDQWKLYGGLRVGHDRKTFDYDFTANTAAQLLGLTGTFAPGYNAKLSETYVTPRLGLQFEPMEGLNLYGGVSSGYKSGGFNSGFVGLGDEGAYDSERVVSYELGLKSATLDDRLKVEASVFYIDWRDQQVQGFNALTGTTPISNASRSESWGGELSVAYDVDDHWSLMAAAGYADATYKDFRNARALDGSGTVDVSGNQQQFVSRFTGSAGLAYQWETGWHDLVGKVGVNYRYRSSYYFDVQNTIRQKGYGLLDAYAGLENDRYAAYLFAKNIGDVDYRIVAADLGTGRLVSPGDPLTFGGSFKVKF*