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SCNpilot_expt_1000_bf_scaffold_866_21

Organism: SCNPILOT_EXPT_1000_BF_Afipia_62_8

partial RP 39 / 55 MC: 2 BSCG 39 / 51 MC: 2 ASCG 11 / 38
Location: comp(13508..15778)

Top 3 Functional Annotations

Value Algorithm Source
penicillin-binding protein 1A; K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-] similarity KEGG
DB: KEGG
  • Identity: 83.5
  • Coverage: 762.0
  • Bit_score: 1276
  • Evalue 0.0
1A family penicillin-binding protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PWS9_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 758.0
  • Bit_score: 1427
  • Evalue 0.0
  • rbh
1A family penicillin-binding protein {ECO:0000313|EMBL:EKS42788.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 758.0
  • Bit_score: 1427
  • Evalue 0.0

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2271
GTGCGCCAGATCGTACCCAGCGAATGGAAAAAGCGGTTCCGGCATTTCCTGCTGGACCTCGACGCGCGGATCGATTCCTCGCTGTTCAATTCCGCTGTCGGCCTGCGCGAATTGTTCGAGCGCTACTCGACCTTCATGGACCGGTTCTATGTCGGCCGCTGGAAACGGTGGGTCTTTATCGAGCCCCTGTCGGAAGCCGCCACTATCGGTCTCGCAGGCATGGTGCTGATGCTGGCGCTGGCGGTCCCGGCCTTCCGCGAAACCTCCGATGACGACTGGCTGAAAAAATCCGACCTCGCGGTGACCTTCCTCGACCGTTACGGCAATCCGATCGGCAGCCGCGGCATCAAGCATAACGACTCGATTCCGCTGGAAGATTTTCCCGACAACCTGATCAAGGCGACGCTGGCCACTGAAGACCGCCGCTTCTACGACCACTTCGGCATCGACGTCGCGGGCACGGCGCGCGCGCTTGTCACCAACGCGCAGGCCGGCGGCGTCCGTCAGGGCGGCTCATCGATCACCCAGCAGCTCGCCAAGAACCTGTTCCTCAACAACGAGCGCACCATCGAGCGCAAGGTGAAGGAAGCGTTCCTCGCCATCTGGCTGGAAACGCGCCTGACCAAGAACGAAATCCTGAAGCTCTATCTCGACCGCGCCTATATGGGCGGCGGCACCTTCGGCGTCGATGGCGCAGCGCATTTCTACTTCAACAAGTCCGCGCGCGACGTGAACCTCGCCGAAGCCGCGATGCTCGCGGGCCTGTTCAAGGCGCCGACCAAATACGCGCCGCATATCAACCTGCCCGCTGCCCGCGCGCGCGCCAACGTCGTGCTCGACAATCTGGTGGACGCAGGCTTCATGACCGAAGGTCAGGTGTTCGGCGCCCGCCGCAATCCGGCGAGCGTGGTCGATCGCCGCGACGAGAATTCGCCGAACTACTATCTCGACTATGCTTTCGACGAGATGCGCAAACTCGTCCAGACGCTGCCGAAATCCTACACCGAGCGCGTCTTCGTGGTCCGCACCGCCATCGACATGAAGGTGCAGCGTGCGGCCGAGGACACCGTCGAGAACCAATTACGCCAGTTCGGCCGCGACTATCATGCGACACAAGCCGCTGTCGTGCTGGCCGATCTCGACGGCGGCGTGCGCGCCATGGTCGGCGGCCGCGACTACGGCGCCAGCCAGTTCAACCGCGCTGTCGACGCCATGCGCCAGCCGGGCTCATCCTTCAAACCGTATGTTTATGCCACCGCGCTGATGAACGGCTTCACGCCGAAATCCATCGTGGTGGATGGCCCGGTCTGCATCGGCAACTGGTGTCCGCAGAACTATGGCCGCTCCTATTCCGGCGCGGTGACGCTGACGCAGGCGATCACCCGCTCGATCAACGTCGTTCCGGTCAAGCTTTCGATTGCGATGGGCGGCAAGGCAGGCCCGAAGGCAGGCCGCGCCAAGATCGTCGAAACCGCGCGCAAGATGGGCATCACCGCGCCGCTGATCGATACGCCGTCGCTGCCGATCGGCTCGACGGAAGTCAGCGTTGTCGAACACGCGGTGGCCTACGCCACCTTCCCCAACAGAGGCCGCGCGGTGAAGCCGCATGCGGTGCTTGAAGTGCGCAGCGGCGCAGGCGATCTGGTCTGGCGCTGGGACCGTGACGGAAAGAAACCCGTGCAGGCCATTCCTGCCAACGTCGCAGCCGAGATGGCCGAAATGATGAGCCACGTGGTCGATGAAGGTACCGCGCGCCGCGCGCGCCTCGACGGCATCCCGGCCGCCGGCAAGACCGGCACCACCAACGCATTCCGCGACGCGTGGTTCGTCGGCTACACCGGCAACTTCACCATGGCGGTCTGGTACGGCAACGACGACTATTCCTCGACCAACCGCATGACGGGCGGCTCGCTTCCCGCTCAGACGTGGCACGACATCATGGAAGTCGCGCATCAGGGCGTCGAAATTCGTGACCTCCCTGGCGTCGGCGCCGGAAAAAAGCTGCCATCGGATGCGCTTGCCGCGGCGAATGCGAAAGCGCCCGAGATCAATCCCGGCCCGCCGCCGATCCTGACCCGGCGCGGCGCGAGCATTCTCGTTCGCGTCGAGAAGCTGTTCGACGACGCGGCCAAGACCATCACCGTTCCCGGCAAGACGTCGTCGAACGACGGAAGCAAACCGGCCTCGCCGTCCACCGTCGCCTTTCCGGACAGCTTCGCGTCGGTTAGTTCAGATCCATCGGCGGCATCGACGCCGCCGCGCAAGAATTGA
PROTEIN sequence
Length: 757
VRQIVPSEWKKRFRHFLLDLDARIDSSLFNSAVGLRELFERYSTFMDRFYVGRWKRWVFIEPLSEAATIGLAGMVLMLALAVPAFRETSDDDWLKKSDLAVTFLDRYGNPIGSRGIKHNDSIPLEDFPDNLIKATLATEDRRFYDHFGIDVAGTARALVTNAQAGGVRQGGSSITQQLAKNLFLNNERTIERKVKEAFLAIWLETRLTKNEILKLYLDRAYMGGGTFGVDGAAHFYFNKSARDVNLAEAAMLAGLFKAPTKYAPHINLPAARARANVVLDNLVDAGFMTEGQVFGARRNPASVVDRRDENSPNYYLDYAFDEMRKLVQTLPKSYTERVFVVRTAIDMKVQRAAEDTVENQLRQFGRDYHATQAAVVLADLDGGVRAMVGGRDYGASQFNRAVDAMRQPGSSFKPYVYATALMNGFTPKSIVVDGPVCIGNWCPQNYGRSYSGAVTLTQAITRSINVVPVKLSIAMGGKAGPKAGRAKIVETARKMGITAPLIDTPSLPIGSTEVSVVEHAVAYATFPNRGRAVKPHAVLEVRSGAGDLVWRWDRDGKKPVQAIPANVAAEMAEMMSHVVDEGTARRARLDGIPAAGKTGTTNAFRDAWFVGYTGNFTMAVWYGNDDYSSTNRMTGGSLPAQTWHDIMEVAHQGVEIRDLPGVGAGKKLPSDALAAANAKAPEINPGPPPILTRRGASILVRVEKLFDDAAKTITVPGKTSSNDGSKPASPSTVAFPDSFASVSSDPSAASTPPRKN*