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SCNpilot_expt_1000_bf_scaffold_1013_4

Organism: SCNPILOT_EXPT_1000_BF_Afipia_62_8

partial RP 39 / 55 MC: 2 BSCG 39 / 51 MC: 2 ASCG 11 / 38
Location: 4064..4957

Top 3 Functional Annotations

Value Algorithm Source
bicarbonate ABC transporter permease n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EDFDD7 similarity UNIREF
DB: UNIREF100
  • Identity: 73.2
  • Coverage: 299.0
  • Bit_score: 453
  • Evalue 2.10e-124
Bicarbonate ABC transporter permease {ECO:0000313|EMBL:KDR88113.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens GW4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.8
  • Coverage: 297.0
  • Bit_score: 448
  • Evalue 7.40e-123
nrtB; nitrate ABC transporter; K15577 nitrate/nitrite transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 71.1
  • Coverage: 298.0
  • Bit_score: 440
  • Evalue 4.50e-121

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGTCCGCTTCCGCCGCCAAGAACGATGTCGTCGTTCCCGGCCCGTTCAAGCAGCCGGCCTCCAAGGTCGTGCCGCTCGCAGTCCAGTCTAAAAAATTTAACTACAGGGCAATGGCGGCCAGCGTCGCGCAAACAATCGTCCCGCCGCTGGTCGTGCTGGTCATCCTGCTTGTGATCTGGCAGGTGGCCTGCTCCAACCCGTCGTCCTCGCTGCCACCGCCCTCGGAAGTCTGGGCCCAGAGCAAGGACCTGATCGTCAACCCGTTCTACGTCAACGGCGACCAGGACATCGGTCTCGGCTGGCGCGTGCTCGTCTCGCTGGAGCGCGTTGCCTACGGCTTCGGTCTGGCGGCCATTGTCGGCGTGTTGGTCGGCGCGATTATTGGCCAGTCGGTCTGGGCGATGCGCGGGCTGGACCCGATCTTTCAGGTGCTTCGCACGGTGCCGCCGCTGGCCTGGCTGCCTCTGTCGCTGGCGGCTTTCCTCGACTCGCGGCCGTCTGCGATCTTTGTGATCTTCATCACCTCGATCTGGCCGATCATCATCAACACGGCCGTCGGCATCCGCAACATTCCGCAAGACTACCGCAACGTCGCGCAGGTGCTGCGGCTGAACCCGATCGAGTTCTTCTACAAGATCATGGTGCCGGCTGCTGCGCCCTACATCTTCTCCGGTCTCAAGATCGGCGTCGGCCTGTCCTGGCTGGCCATCGTCGCTGCCGAGATGCTGACCGGCGGCGTCGGCATCGGCTTCTTCATCTGGGACGCATGGAATTCGTCCCGGCTCACCGACATCATCGTGGCGCTGGTCTATATCGGCACTGTCGGCTTCGTGCTCGACAAGCTCGTGACCCTTCTTGGCGCGGTCATTACCCGCGGCACCGCGTCGAACTGA
PROTEIN sequence
Length: 298
MSASAAKNDVVVPGPFKQPASKVVPLAVQSKKFNYRAMAASVAQTIVPPLVVLVILLVIWQVACSNPSSSLPPPSEVWAQSKDLIVNPFYVNGDQDIGLGWRVLVSLERVAYGFGLAAIVGVLVGAIIGQSVWAMRGLDPIFQVLRTVPPLAWLPLSLAAFLDSRPSAIFVIFITSIWPIIINTAVGIRNIPQDYRNVAQVLRLNPIEFFYKIMVPAAAPYIFSGLKIGVGLSWLAIVAAEMLTGGVGIGFFIWDAWNSSRLTDIIVALVYIGTVGFVLDKLVTLLGAVITRGTASN*