ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1630_15

Organism: SCNPILOT_EXPT_1000_BF_Afipia_62_8

partial RP 39 / 55 MC: 2 BSCG 39 / 51 MC: 2 ASCG 11 / 38
Location: 9466..10512

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00036EF054 similarity UNIREF
DB: UNIREF100
  • Identity: 75.3
  • Coverage: 340.0
  • Bit_score: 503
  • Evalue 1.60e-139
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34057.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 346.0
  • Bit_score: 487
  • Evalue 2.20e-134
signal peptide similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 358.0
  • Bit_score: 416
  • Evalue 6.20e-114
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1047
ATGCCCAAGAGCCGAGCCCGCACTTTCCGCCAAATGCGTCTGTCGCTGACGGCCGTGCTGTGCGCGCTCTGTCTCAACGCTGCGCCGGGTGTTGCGGCGACGGCGCTGCACTTTTCGCTCGACCGGCCGATCGACGGCGCGGCGGCGCCCTTCATCGTCGCCAACAGCCAGGGTCTCTATCGCGCCGACAATCTCACCGTCACGATGAGCAATGCTGCGAATTCGCCGGATGCGATCGCGCGGGTCGCCGCAGGCACCAGCGATATCGCACTTGCGGACATCAACGCGCTGATCCGTTTTCGCGACAAGGAAGGATCGCCGCCGGTGAAGGCGGTGTTCGTGCTCTACAACAAGGCGCCCTATGCCATCGTCGCGCGCAAGAGCCGCGGCATCGCATCCATGGCCGACATCGAAGGCAAGACCATCGGCGTCGCGGACGGCGATCTCGCATCGAAACTCTGGCCCGCCGTCGCGCGCCACAACAACATCAAGCCGGGCAAGGTGAAGCTGGAAAAGATCAGCGCCGCGGTACGCGAGCCGATGCTGTCCGCCGGACAGGTCGATGCGGTGACCGGCTTCTCCTTTCTCTCCGCGATCAACCTGCGCGACCGCGGCGTGCCCGCGAACGATCTCGCGGTGCTGCGCTTCTCCGAATTCGGCAGCGATGTCTACGGCCACGCGCTGATCGTCAATCCGAAATTCGCCGCCGAACATCCGGATGCGGTGAAAGCGTTCGTGCGTGCGAGCATCGCGGGCCTCCGTCTCACGATCAAAGACCCTGCCCGCGCCATCGATGACGTGCTGGCGCAGATGAGCAACGGATCGCACGACCTTGAGCTGGAACGGCTGCGCGCCGTCCTGAAAGACAACATCGTCACCGGCGACGTGCGAAAGAACGGCCTCGGCGGCATCGACGACGCCCGCTTCGCCGCCGGTCTCAGCCAGATCGCGGAGGACCGTGAATTCCGCAAGCGGCCGCTGCCAGCCGATATTTTCGACGACACGTTCCTGCCGCCGCCGGACGCACGCGGGATCGATCTGCCGTAA
PROTEIN sequence
Length: 349
MPKSRARTFRQMRLSLTAVLCALCLNAAPGVAATALHFSLDRPIDGAAAPFIVANSQGLYRADNLTVTMSNAANSPDAIARVAAGTSDIALADINALIRFRDKEGSPPVKAVFVLYNKAPYAIVARKSRGIASMADIEGKTIGVADGDLASKLWPAVARHNNIKPGKVKLEKISAAVREPMLSAGQVDAVTGFSFLSAINLRDRGVPANDLAVLRFSEFGSDVYGHALIVNPKFAAEHPDAVKAFVRASIAGLRLTIKDPARAIDDVLAQMSNGSHDLELERLRAVLKDNIVTGDVRKNGLGGIDDARFAAGLSQIAEDREFRKRPLPADIFDDTFLPPPDARGIDLP*