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SCNpilot_expt_1000_bf_scaffold_1183_3

Organism: SCNPILOT_EXPT_1000_BF_Afipia_62_8

partial RP 39 / 55 MC: 2 BSCG 39 / 51 MC: 2 ASCG 11 / 38
Location: 1697..1957

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.1
  • Coverage: 82.0
  • Bit_score: 157
  • Evalue 9.90e-36
Ribonuclease VapC n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SUC0_NITWN similarity UNIREF
DB: UNIREF100
  • Identity: 95.1
  • Coverage: 82.0
  • Bit_score: 157
  • Evalue 7.10e-36
twitching motility protein PilT; K07062 similarity KEGG
DB: KEGG
  • Identity: 95.1
  • Coverage: 82.0
  • Bit_score: 157
  • Evalue 2.20e-36

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Taxonomy

Nitrobacter winogradskyi → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 261
TTGAGTTATCTGCTCGACACCAACGTCGTCTCTGAACTGCGCAAGATCGGCGACGGGAAGGCCGATGCCAGAGTCGTCGCATGGGTCGACGCAGAGGACGCCGAGAGCTTCTTCGTCTCGGCAATCACCATCCTTGAACTGGAACGCGGTGTGCTCGGCATCCAACGTCGCGACGCCGCGCAGGGCGCGCGGCTGCGCGCCTGGCTGGACAATCATGTCCGACCCGAATTTGCCGGGCGCATCCTGGCCCCTGAACATTAA
PROTEIN sequence
Length: 87
LSYLLDTNVVSELRKIGDGKADARVVAWVDAEDAESFFVSAITILELERGVLGIQRRDAAQGARLRAWLDNHVRPEFAGRILAPEH*