ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1183_12

Organism: SCNPILOT_EXPT_1000_BF_Afipia_62_8

partial RP 39 / 55 MC: 2 BSCG 39 / 51 MC: 2 ASCG 11 / 38
Location: 12097..14118

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein traG n=2 Tax=Oligotropha carboxidovorans RepID=B6JHJ8_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 92.7
  • Coverage: 673.0
  • Bit_score: 1261
  • Evalue 0.0
  • rbh
Conjugal transfer protein traG {ECO:0000313|EMBL:AEI06321.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 673.0
  • Bit_score: 1261
  • Evalue 0.0
traG3; conjugal transfer protein traG; K03205 type IV secretion system protein VirD4 similarity KEGG
DB: KEGG
  • Identity: 92.7
  • Coverage: 673.0
  • Bit_score: 1261
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2022
GTGTCCGCCAGCCGCGTTGTCTGGGGCCAGATCGTTGTCGTGTTCGCGATCGTGCTGCTCGCGGTCTGGATCGCGACGCAGTGGGTCGCATGGCGGCTCGGCTTTCAGCCGCAGCTCGGTGCGCCCTGGTTTTCCGTGGCCGCCTTGCCAATCTATCCACCGCCCGCATTCTTTGCTTGGTGGTTCTTCTACGATGCCTATGCGCCGCACATTTTTCTGGAGGGCGCTGGCATTGCCGCCTCGGGCGGACTGGTCGCGATTGCCGTCGCCATCCTCATGTCGATCTATCGGGCGCGCGAGGCGAAGGACGTGCGCACCTTCGGCTCCGCCCGCTGGGCCGAGCCGCATGAGATCAAATCCGCGGGGCTCCTCGGCGACGATGGCATTGTTCTCGGCCGCCTCGACCGGACCTATCTGCGACATGATGGCGCCGAGCATGTCCTGTGCTTCGCCCCGACACGGTCCGGCAAGGGCGTCGGCTTGGTCGTGCCAACGCTGCTCACCTGGCCCGGCGCGTCGATCGTTCATGACATTAAGGGAGAGAACTGGGAGCTGACCGCGGGGTTTCGCGCGCGCTTCGGCCGCGTGTTGTTGTTCGATCCCACCAACGCGAGCTCGGCCGCCTACAACCCGCTGCTCGAGGTGCGCAAAGGTGAGTGGGAGGTGCGCGATGTTCAGAACGTCGCCGACGTGCTGGTCGATCCCGAAGGCTCGCTGGAGAAGCGCAATCATTGGGAGAAGACATCCCATTCGCTTCTGGTCGGCGCGATCCTCCATGTCCTCTATGCGGAGACCGATAAGACGCTCGCCGGGGTGGCAGCGTTCCTGTCCGATCCGCGCCGGCCGATCGAGTCGACATTGTCCGCAATGATGACGACGCCGCATCTCGGCGAGAAGGGACCACATCCCGTCGTCGCCAGCGCGGCGCGCGAGCTGCTCAACAAGTCCGATAACGAAAGGTCGGGCGTTTTGAGCACCGCCATGTCGTTTCTCGGCCTCTATCGCGATCCTGTCGTGGCCGCCGTCACGGCGCGCTGTGACTGGCGCATCGCCGACCTCGTGTCGGGCGAGAAGCCCACGACGCTGTATCTCGTGGTGCCACCCTCCGACATTAGCCGGACGAAACCGCTCGTGCGTCTCGTGCTCAATCAGATCGGCCGACGCCTGACCGAGGACCTCCATGCAAAAGGCCGCCGCCATCGCCTGCTGCTGATGCTCGACGAGTTTCCAGCGCTCGGTCGGCTCGACTTCTTTGAGAGCGCGTTGGCCTTCATGGCCGGTTATCAGATCAAGGCGTTTCTCATTTCGCAATCTTTGAACCAGATTGAAAAGGCCTACGGTCAGAACAACTCCATCCTCGACAATTGCCACGTTAGAGTCAGTTTCGCGACCAATGACGAGAGGACGGCGAAAAGAGTCAGCGACGCGCTCGGCACCGCGACCGAGATGCGCGCCATGCAGAACTATGCCGGCCATCGTCTCGCGCCCTGGCTCGGCCATCTGATGATTTCGCGCTCGGAGACGGCGCGGCCGCTACTCACCGCCGGCGAGGTGATGCAGCTCCCGCCTGACGATGAGATCGTCATGGTCGCCGGCGTTCCGCCAGTGCGTGCCAAGAAGGCGCGCTATTACGAGGATGCCCGCCTGAAAGAGCGGTTGTTGCCCGTGCCACAAAACCCGAAGGCCGGTCTCGCGCCGAAGCCTGACGACTGGTCGGTCTTGAAGCCCATTGCTGCGCCGACCCCGGCCGGCAAGGGCGCGGCCGGATCGCAAGCCGCGCGAGCGGCAAATGATGCAGGCAAGCCCGATGACGATCCCGCCAATGCGGGCCTGCGCCGCGAGCCCGGCCTTGAACCGCACAAGGACATCGCGCCGGAGCCGGCGAAGACTCCCACCAACGAGTTCGATCCCGATGCCGAGGAGCCCGAGCGTGAGGTTGTCGCCAACCGTGCGCTGGCGCGCGACATGCGATTGATGGTGCGGCGGATCGCACTGGACCCCGGCGACGGCATGGAGCTGTAA
PROTEIN sequence
Length: 674
VSASRVVWGQIVVVFAIVLLAVWIATQWVAWRLGFQPQLGAPWFSVAALPIYPPPAFFAWWFFYDAYAPHIFLEGAGIAASGGLVAIAVAILMSIYRAREAKDVRTFGSARWAEPHEIKSAGLLGDDGIVLGRLDRTYLRHDGAEHVLCFAPTRSGKGVGLVVPTLLTWPGASIVHDIKGENWELTAGFRARFGRVLLFDPTNASSAAYNPLLEVRKGEWEVRDVQNVADVLVDPEGSLEKRNHWEKTSHSLLVGAILHVLYAETDKTLAGVAAFLSDPRRPIESTLSAMMTTPHLGEKGPHPVVASAARELLNKSDNERSGVLSTAMSFLGLYRDPVVAAVTARCDWRIADLVSGEKPTTLYLVVPPSDISRTKPLVRLVLNQIGRRLTEDLHAKGRRHRLLLMLDEFPALGRLDFFESALAFMAGYQIKAFLISQSLNQIEKAYGQNNSILDNCHVRVSFATNDERTAKRVSDALGTATEMRAMQNYAGHRLAPWLGHLMISRSETARPLLTAGEVMQLPPDDEIVMVAGVPPVRAKKARYYEDARLKERLLPVPQNPKAGLAPKPDDWSVLKPIAAPTPAGKGAAGSQAARAANDAGKPDDDPANAGLRREPGLEPHKDIAPEPAKTPTNEFDPDAEEPEREVVANRALARDMRLMVRRIALDPGDGMEL*