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SCNpilot_expt_1000_bf_scaffold_1183_30

Organism: SCNPILOT_EXPT_1000_BF_Afipia_62_8

partial RP 39 / 55 MC: 2 BSCG 39 / 51 MC: 2 ASCG 11 / 38
Location: 28495..29493

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbB n=2 Tax=Oligotropha carboxidovorans RepID=B6JHP6_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 332.0
  • Bit_score: 616
  • Evalue 1.20e-173
  • rbh
trbB3; conjugal transfer protein TrbB; K03196 type IV secretion system protein VirB11 similarity KEGG
DB: KEGG
  • Identity: 95.8
  • Coverage: 332.0
  • Bit_score: 616
  • Evalue 3.90e-174
  • rbh
Conjugal transfer protein TrbB {ECO:0000313|EMBL:AEI06333.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 332.0
  • Bit_score: 616
  • Evalue 1.70e-173

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Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 999
ATGGCTGGTCATCATCACAGCAATGAAGGGGTGTCGCGCGGCGCGCGCATGCTGCGCACGGCGCTCGGCCCGGCGATCGCGCGCTATCTCGAAGACCCCGCCGTCGTCGAAGTGATGTTGAATCCCGATGGCCGGCTCTGGGTCGACCGGCTGCGCGAAGGTCTTGTCGCGACCGACGACGTGCTGATCCCGGCCGATGGCGAGCGCATCGTGCGCCTGGTTGCGCATCACGTCGGCGCGGAGGTGCATCCCGGCAGCCCGCGCGTCTCGGCCGAGCTGCCTGAGACCGGCGAGCGGTTTGAAGGGCTCTTGCCTCCTGTGGTGATGGCGCCCACTTTCGCCATCCGCAAGCCGGCGGTCGCGGTGTTCACGCTCGCCGATTACGTCGCCGCAGGCATCATGACGGCCGCGCAAGCCGACGTGCTCCGGCTCGCGGTCGAGCGGCGCAAGAACATTCTTGTCGCCGGCGGCACCTCCACCGGCAAGACGACCCTGACGAACGCTTTGCTGGCGGAAGTCGCCAAGACGTCCGACCGCGTGGTGCTGATCGAGGACACCCGCGAGCTGCAATGCGCAGCGCCGAACCTTGTCGCGCTGCGCACCAAGGATGGCGTCGCTTCGCTCTCCGATCTCGTGAAGTCGTCGCTGCGGCTGCGTCCCGATCGCATTCCAGTCGGCGAGGTGAGGGGCAGCGAAGCCCTGGACCTGCTCAAGGCCTGGGGGACCGGCCATCCCGGCGGGGTCGGCACGATCCACGCCAATACCGCGCTCGGTGCGCTGCGTCGCCTGGAGCAGCTTGTGCAGGAGGCCGTCGTGACGGTGCCTCGCGCTCTCATCGCCGAGACCATCGACATCGTTGCCGTTCTCTCGGGCCGCGGCGCCGAAAGGCGCCTCGCTGAGATCGCCCATGTCGACGGGCTCGATCCAGCGACGGGCGATTACCGCACGCTCAATGCGCTGCTCCCATCCTCACACGCCGCAAAAGGAGACTCCGAATGA
PROTEIN sequence
Length: 333
MAGHHHSNEGVSRGARMLRTALGPAIARYLEDPAVVEVMLNPDGRLWVDRLREGLVATDDVLIPADGERIVRLVAHHVGAEVHPGSPRVSAELPETGERFEGLLPPVVMAPTFAIRKPAVAVFTLADYVAAGIMTAAQADVLRLAVERRKNILVAGGTSTGKTTLTNALLAEVAKTSDRVVLIEDTRELQCAAPNLVALRTKDGVASLSDLVKSSLRLRPDRIPVGEVRGSEALDLLKAWGTGHPGGVGTIHANTALGALRRLEQLVQEAVVTVPRALIAETIDIVAVLSGRGAERRLAEIAHVDGLDPATGDYRTLNALLPSSHAAKGDSE*