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SCNpilot_expt_1000_bf_scaffold_1816_5

Organism: SCNPILOT_EXPT_1000_BF_Afipia_62_8

partial RP 39 / 55 MC: 2 BSCG 39 / 51 MC: 2 ASCG 11 / 38
Location: comp(2749..3186)

Top 3 Functional Annotations

Value Algorithm Source
KLTH0D05698p n=1 Tax=Lachancea thermotolerans (strain ATCC 56472 / CBS 6340 / NRRL Y-8284) RepID=C5DGJ0_LACTC id=5225052 bin=16ft_combo_ws3_JS1 species=Lachancea thermotolerans genus=Lachancea taxon_order=Saccharomycetales taxon_class=Saccharomycetes phylum=Ascomycota tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 54.8
  • Coverage: 146.0
  • Bit_score: 127
  • Evalue 1.00e-26
Uncharacterized protein {ECO:0000313|EMBL:CEG07156.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.0
  • Coverage: 129.0
  • Bit_score: 143
  • Evalue 1.90e-31

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 438
ATGGGCGCGCGCGACCGCTGGGCCTGCGCGACCATCTGCACGATCTGCGACAGCAGCGTGTCGCGGCCGACCTTTTCCGCCCGCATGACGAAGCCGCCCGACTGGTTCAGCGAGCCGGCGACGACCTTCGCCCCCGGCTCTTTGGTGACCGGCATGGATTCGCCCGTGACCAGCGATTCGTCGATGGAGGACCGTCCCTCGATCATGATTCCGTCGACCGGGACCTTCTCGCCCGGGCGCACGCGCAGCCTGTCGCCGACGTGCAGGCTGTCCAGCGCGACCTCATGGTCCTCGCCCGCGTCGTCCACCAGCCTTGCGGTCTTCGGGGCGAGGTCGAGCAGCGCCTTGATGGCGCCCGACGTCGCCTCCCGGGCGCGCAATTCGAGGACCTGGCCGAGCAGGACGAGAACGGTGATGACGGCGGCCGCCTCGAAGTAG
PROTEIN sequence
Length: 146
MGARDRWACATICTICDSSVSRPTFSARMTKPPDWFSEPATTFAPGSLVTGMDSPVTSDSSMEDRPSIMIPSTGTFSPGRTRSLSPTCRLSSATSWSSPASSTSLAVFGARSSSALMAPDVASRARNSRTWPSRTRTVMTAAASK*