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SCNpilot_expt_1000_bf_scaffold_1816_29

Organism: SCNPILOT_EXPT_1000_BF_Afipia_62_8

partial RP 39 / 55 MC: 2 BSCG 39 / 51 MC: 2 ASCG 11 / 38
Location: 25785..26165

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L21 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P1F9_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 125.0
  • Bit_score: 231
  • Evalue 4.30e-58
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 125.0
  • Bit_score: 231
  • Evalue 6.00e-58
rplU; 50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 similarity KEGG
DB: KEGG
  • Identity: 88.5
  • Coverage: 122.0
  • Bit_score: 215
  • Evalue 7.70e-54

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGTTCGCAGTCATCAAAACCGGCGGCCGGCAGTTCCGCGTCGTTCCGGATGATGTGCTTGAAATTGGAAAGATCGCCGGCGACGTCGGCACGATCGTGCAGCTTGGCGAAGTGCTGGTGGTGGGCGGCGATACGCCGGTCCTCGGCGCTCCGTTCGTGGGCGGCGCGTCCGTGGCGGCGGAAGTGCTGGACCACAAGCGTGGCGCGAAGGTCATCGCCTTCAAGAAGCGCCGCCGCAAGAATTCGAAGCGCAAGCGCGGCTATCGCGACGAGATCACCGTGATCCGCGTGACCGAAATCCTCACCGACGGCAAGGCTCCCAGCGTGGGTCCGCGCCCGAAGAAGGAAAAGAAGGTCGCCGCCGCGAGCGATGAAAAGTGA
PROTEIN sequence
Length: 127
MFAVIKTGGRQFRVVPDDVLEIGKIAGDVGTIVQLGEVLVVGGDTPVLGAPFVGGASVAAEVLDHKRGAKVIAFKKRRRKNSKRKRGYRDEITVIRVTEILTDGKAPSVGPRPKKEKKVAAASDEK*