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SCNpilot_expt_1000_bf_scaffold_2367_1

Organism: SCNPILOT_EXPT_1000_BF_Afipia_62_8

partial RP 39 / 55 MC: 2 BSCG 39 / 51 MC: 2 ASCG 11 / 38
Location: comp(2..367)

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis protein CheY n=1 Tax=Afipia birgiae RepID=UPI0002F2A0D3 similarity UNIREF
DB: UNIREF100
  • Identity: 96.7
  • Coverage: 122.0
  • Bit_score: 243
  • Evalue 8.00e-62
Uncharacterized protein {ECO:0000313|EMBL:EKS36102.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.9
  • Coverage: 122.0
  • Bit_score: 243
  • Evalue 1.50e-61
response regulator receiver domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 94.3
  • Coverage: 122.0
  • Bit_score: 239
  • Evalue 6.20e-61

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATGTATATTATCGATTTCAACAAGCTGCGGTTTCTCGTCTGCGACGACAATGCTCATATGCGCCGCATCCTGCGGACGCTGCTGCATTCGTTCGGCGCGCGGGAAGTCTATGAGGCCGAAGACGGTGCCACCGCGCTTGATATGTACTCGCACTATGTCCCGGACATCGTCATCACCGACTGGGCGATGCCGATTTTCGACGGACTGGAGCTTGCGCAGATGATCCGCCAGCCGGAAGGCCTCGGCAATCCCTACGCGCCGATCATCATGCTGACCGGCCATTCAGAGAAGCGCCGCGTGATGGTGGCGCGGGATGCGGGCGTCACCGAATTTCTCGCCAAGCCGATTTCCGCCAAGGGGCTTTAC
PROTEIN sequence
Length: 122
MYIIDFNKLRFLVCDDNAHMRRILRTLLHSFGAREVYEAEDGATALDMYSHYVPDIVITDWAMPIFDGLELAQMIRQPEGLGNPYAPIIMLTGHSEKRRVMVARDAGVTEFLAKPISAKGLY