ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2367_9

Organism: SCNPILOT_EXPT_1000_BF_Afipia_62_8

partial RP 39 / 55 MC: 2 BSCG 39 / 51 MC: 2 ASCG 11 / 38
Location: comp(7239..7619)

Top 3 Functional Annotations

Value Algorithm Source
photosystem reaction center subunit H n=1 Tax=Afipia birgiae RepID=UPI0002F1F3AF similarity UNIREF
DB: UNIREF100
  • Identity: 73.2
  • Coverage: 127.0
  • Bit_score: 191
  • Evalue 3.80e-46
Uncharacterized protein {ECO:0000313|EMBL:EKS36094.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 126.0
  • Bit_score: 185
  • Evalue 5.00e-44
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 126.0
  • Bit_score: 162
  • Evalue 1.00e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 381
GTGGGACTTGCGGTCTATAACGACTCCAACGAGAAGCTCGGCGACATCAGCGAAATCCTTGTCGACAATACCGGCAAGATCAACGCAGTCGTTGTTGGCGTCGGCGGATTCCTCGGCATGGGCCAGCACGACATCGCCGTCTCGTTCGACAAGCTGAAATGGGTCAACGAACCGGTTCGTTCGGCCTCGGCTGACCGCACGCCGGCCGCACCCGGCATGTCGCCTTCGGCGGGCACAACCACCGGCGCAGCGACGACCAGCACCGCGACAAAGTCGGCGACAGCGACGAAGGACAACTGGTATCCGGACCATGCCGTGATGAGCGGCACCAAGGACGAGTTGAAGGCGATGCCTGCGTTCAAATATTCGGATTACAACTAA
PROTEIN sequence
Length: 127
VGLAVYNDSNEKLGDISEILVDNTGKINAVVVGVGGFLGMGQHDIAVSFDKLKWVNEPVRSASADRTPAAPGMSPSAGTTTGAATTSTATKSATATKDNWYPDHAVMSGTKDELKAMPAFKYSDYN*