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SCNpilot_expt_1000_bf_scaffold_3015_1

Organism: SCNPILOT_EXPT_1000_BF_Afipia_62_8

partial RP 39 / 55 MC: 2 BSCG 39 / 51 MC: 2 ASCG 11 / 38
Location: comp(1..567)

Top 3 Functional Annotations

Value Algorithm Source
spermidine synthase n=1 Tax=Afipia birgiae RepID=UPI0002E111D3 similarity UNIREF
DB: UNIREF100
  • Identity: 83.1
  • Coverage: 189.0
  • Bit_score: 311
  • Evalue 6.40e-82
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS39605.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 189.0
  • Bit_score: 309
  • Evalue 3.40e-81
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 75.8
  • Coverage: 190.0
  • Bit_score: 282
  • Evalue 9.90e-74

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
TTGATCCCCTGGGAACTTCTGGATACCGCGCAGGTGCCGGGCGGCGGCGAACTTCGCCTGATGCGCAGGGGCGCCGAATTCTCCATCAAGCTCGGCCAGAATGAGTTGATGAACAGCCGTCTCAGCGGATCGGAGGAGGCGCTGGCGACGCTTGCCTGGAAGCGCGTTCAGCCACGAAACAAGCCGCGCATGCTGATCGGCGGACTGGGCATGGGGTTCACGCTGCGCGCCGCACTGGCCGTGCTCGGTCCCGATGCGCGGATCGTCGTATCCGAACTTGTGCCGAGTGTGGTGGCATGGGCGCGGGGGCCGATGGCGGAAATCTTTGGCAGCAGCCTGACGGATCCGCGCGTGACCATTCGCGAAATCGATGTCGGCCAACTGATCCGCGCCGAGCGTGCCGCTTACGACATCATCCTTCTGGATGTCGACAACGGTCCCGAAGGTCTGACGCGGGAAGCCAACGACGCGCTTTACAGTCAGTCGGGATTAGCCGCGGCTCATGCAGCGCTGCGGCCCGGTGGCGTGCTCGGCGTCTGGTCGTCCGGACCTGATGCCCGTTTCACG
PROTEIN sequence
Length: 189
LIPWELLDTAQVPGGGELRLMRRGAEFSIKLGQNELMNSRLSGSEEALATLAWKRVQPRNKPRMLIGGLGMGFTLRAALAVLGPDARIVVSELVPSVVAWARGPMAEIFGSSLTDPRVTIREIDVGQLIRAERAAYDIILLDVDNGPEGLTREANDALYSQSGLAAAHAALRPGGVLGVWSSGPDARFT