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SCNpilot_expt_1000_bf_scaffold_3015_24

Organism: SCNPILOT_EXPT_1000_BF_Afipia_62_8

partial RP 39 / 55 MC: 2 BSCG 39 / 51 MC: 2 ASCG 11 / 38
Location: 20930..22372

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein RadA n=1 Tax=Afipia birgiae RepID=UPI0002E46D24 similarity UNIREF
DB: UNIREF100
  • Identity: 89.4
  • Coverage: 480.0
  • Bit_score: 832
  • Evalue 1.60e-238
  • rbh
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 473.0
  • Bit_score: 829
  • Evalue 1.90e-237
DNA repair protein RadA; K04485 DNA repair protein RadA/Sms similarity KEGG
DB: KEGG
  • Identity: 84.5
  • Coverage: 489.0
  • Bit_score: 801
  • Evalue 1.60e-229

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1443
ATGGCGCGCGCGGCGGTTCTTTCTTTCGTCTGCCAGAATTGCGGCGCGGCCTACAACAAGTGGCAGGGCAAGTGCGAGTCCTGCGGCGAGTGGAATACGCTGTCGCAGGACGATCCGACCGGCGCGGCGTCGGTCCCCGCCAACCTGCGCGCCAAGCGCCGCGGCCGCCTGTTCACCCTTGAAACCCTCACCGGCGCGAGTCCGGAGCCGCCGCGTCTCTCGTCTGGCATGGCGGAACTCGATCGCGTCACCGGCGGAGGCTTCGTGCGCGGTTCAGTGCTGCTGATGGCGGGTGACCCCGGCATCGGCAAATCCACCCTGCTCACGCAGGCCACCAGCATGCTGGCGCGGAACGGGCACCGCGTCGTCTATATCTCCGGCGAAGAAGCCGTCGGACAGGTGCGGCTGCGCGCGGCGCGCCTCGGCCTTGCAAACGCCGCCGTCGAGCTTGCGGCCGAAACCTCGGTCGAAGATATCATCGCCACGCTGTCGGAAGGCAAGCCGCCTCGTCTTGTGGTCATCGACTCGATCCAGACCATGTGGACCGACACCGTGGAATCCGCGCCCGGCACCGTGACGCAGGTTCGCGCCTCGGCACAGGCGCTCATTCGTTTCGCCAAGAAATCCGGCGCGGCGCTGATCCTTGTCGGCCATGTCACCAAGGACGGCCAGATCGCGGGACCGCGCGTGGTCGAACACATGGTCGATGCCGTGATGAGTTTCGAGGGCGAAGGCTCGCAGCAGTTCCGCATCCTGCGCGCGGTGAAGAACCGTTTCGGCCCCACCGACGAGATCGGCGTGTTCGAGATGACGGGCCTCGGCCTGCGCGAAGTCACCAATCCGTCCGAACTGTTCCTGTCCGAACGCGATCTCGGCAGCCCCGGTACCGCCGTGTTCGCCGGGATCGAGGGCACCCGCCCCGTGCTGGTGGAACTGCAGGCGCTGGTTGCGCCCACCACTCTTGGCACGCCGCGACGCGCGGTGGTCGGCTGGGATTCAAGCCGGCTATCGATGGTGCTGGCGGTGCTGGAGGCCCATTGCGGGGTCAAGCTCTCCGGCTATGACGTCTATTTCAATGTCGCCGGCGGCCTGCGCATCAATGAACCGGCCGCCGACCTCGCCGCAGCGGCGGCGCTGGTGTCGTCGCTGGCGAACGCGCCCCTGCCGGTCGATGCGGTCTATTTCGGCGAAATCTCGCTGTCGGGCGCGGTGCGGCCGGTCGCGCAGACCTCGGCGCGCCTCAAGGAAACCGCCAAGCTCGGCTTCGGCCGCGCCGGTCTCCCGGAAACCACACGTGGCGATACAGGAGGCGACGCGGGCCTGTCCCTCTCCAGCATCGGATCGCTGACCTCTCTGGTGGCCGACATCGCAGCGAAGGGCCGCAAAGCCACAACTTCAGGAAAATCCGCTTCGAACGCCGGATTCCGGCCCGACAACGGCTAA
PROTEIN sequence
Length: 481
MARAAVLSFVCQNCGAAYNKWQGKCESCGEWNTLSQDDPTGAASVPANLRAKRRGRLFTLETLTGASPEPPRLSSGMAELDRVTGGGFVRGSVLLMAGDPGIGKSTLLTQATSMLARNGHRVVYISGEEAVGQVRLRAARLGLANAAVELAAETSVEDIIATLSEGKPPRLVVIDSIQTMWTDTVESAPGTVTQVRASAQALIRFAKKSGAALILVGHVTKDGQIAGPRVVEHMVDAVMSFEGEGSQQFRILRAVKNRFGPTDEIGVFEMTGLGLREVTNPSELFLSERDLGSPGTAVFAGIEGTRPVLVELQALVAPTTLGTPRRAVVGWDSSRLSMVLAVLEAHCGVKLSGYDVYFNVAGGLRINEPAADLAAAAALVSSLANAPLPVDAVYFGEISLSGAVRPVAQTSARLKETAKLGFGRAGLPETTRGDTGGDAGLSLSSIGSLTSLVADIAAKGRKATTSGKSASNAGFRPDNG*