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SCNpilot_expt_1000_bf_scaffold_3264_6

Organism: SCNPILOT_EXPT_1000_BF_Afipia_62_8

partial RP 39 / 55 MC: 2 BSCG 39 / 51 MC: 2 ASCG 11 / 38
Location: comp(5298..5996)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding response regulator KdpE n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QKF1_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 74.6
  • Coverage: 228.0
  • Bit_score: 350
  • Evalue 1.20e-93
  • rbh
DNA-binding response regulator KdpE {ECO:0000313|EMBL:EGP08320.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.6
  • Coverage: 228.0
  • Bit_score: 350
  • Evalue 1.60e-93
two component transcriptional regulator; K07667 two-component system, OmpR family, KDP operon response regulator KdpE similarity KEGG
DB: KEGG
  • Identity: 73.9
  • Coverage: 226.0
  • Bit_score: 336
  • Evalue 5.50e-90
  • rbh

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Taxonomy

Bradyrhizobiaceae bacterium SG-6C → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGACCGCCAGCAACCGCGTACTCATCGTTGACGACGAGGCGGCCATCCTGAAATTCCTGCGGCCCGCCCTCGAAGCCAACAACTACCAGATCGAAGTGGCCGCGACCGTCGCCGAAGCCAAGCAGATGATTGCGTCCAAGGCGCCCGATATTGTCGTGCTCGACCTGGGCTTACCGGATGGCGATGGGAAGGACGTGATCAAAAACACGCGCGAATGGTCGGACGTTCCCATCATCGTGCTGTCCGCACGCGACCGCGAGACGGAAAAGATCGACGCACTGGATCTCGGCGCGGACGACTACGTCAACAAGCCATTCAATGTCGGCGAGCTGCTTGCGCGTATGCGAGCTGCAACCCGGCATCGCTTGCAGCGACATGACGAGAAGGCGACACTGGTCATCGACGATCTGGCGATCGACAGCCCACGCCATCGTGTCACCAGGAAAGATATTGAGATCAAACTGACCCCGAAGGAATTTGAGCTTCTATCCTTCCTGGCGCGACATGTCGGCAAGGTACTCACGCATCGGCAGATCCTCACCGCAGTCTGGGGACCTGCACATACCGCGGACACGCAGTATCTTCGCGTTTATATCGGGCAGTTGCGTCAGAAAATCGAAGTCAGACCTGACAATCCAAAGATCATCATCACCGAGCCAGGCATCGGCTACCGAATTATTGATGTAGGCATGCCCTGA
PROTEIN sequence
Length: 233
MTASNRVLIVDDEAAILKFLRPALEANNYQIEVAATVAEAKQMIASKAPDIVVLDLGLPDGDGKDVIKNTREWSDVPIIVLSARDRETEKIDALDLGADDYVNKPFNVGELLARMRAATRHRLQRHDEKATLVIDDLAIDSPRHRVTRKDIEIKLTPKEFELLSFLARHVGKVLTHRQILTAVWGPAHTADTQYLRVYIGQLRQKIEVRPDNPKIIITEPGIGYRIIDVGMP*