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SCNpilot_expt_1000_bf_scaffold_3264_14

Organism: SCNPILOT_EXPT_1000_BF_Afipia_62_8

partial RP 39 / 55 MC: 2 BSCG 39 / 51 MC: 2 ASCG 11 / 38
Location: comp(16333..18732)

Top 3 Functional Annotations

Value Algorithm Source
diguanylate phosphodiesterase n=1 Tax=Afipia birgiae RepID=UPI0002E284C0 similarity UNIREF
DB: UNIREF100
  • Identity: 79.3
  • Coverage: 803.0
  • Bit_score: 1262
  • Evalue 0.0
  • rbh
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EKS37003.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.1
  • Coverage: 803.0
  • Bit_score: 1260
  • Evalue 0.0
diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 61.7
  • Coverage: 792.0
  • Bit_score: 959
  • Evalue 7.70e-277
  • rbh

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2400
ATGCTCAAGGTCTATAACTGTATCGCCGCCGCCCATGACTTGCGGCTGGTTACTCTTGCCGCCGTCATTTGCGCCCTCTCATCCTTCGCAGCCATCAACCTGCTCCGGCACGCCCGCGCGTCGACGGGCCACATGCGCCATGTCTGGCTCGTGGTGTCGGCGATCTCGACCGGCTTCGGCATCTGGTCCACGCACTTCATCGCCATGCTCGCGTTCTCGCCCGGCATTCCAAGCGGCTACAACATCGCCCTGACCGCTCTTTCGCTCGCCGCCGCGATCGTTTTGACCTGCGCCGGTCTCGCGATGGCGATGGTGCAGAATTCCAGCTTCGGTCTCTGGTTCGGCGGCGCGGTGGTCGGCGGCGGAATCGCCACCATGCATTATCTCGGTATGGCCGCATTCGAGGTCGAAGGCACCGTCCTGTGGGACCCTGTGCTTGTCGTCGCCTCCATCTTGCTCGGCACCCTGATCGGCGCCACCGCGTTGCCTGCGGGCCTTCGCGATGCTTCGATGAAGTGGAAGGTCACCGGCTCCCTGCTGCTCACCGCCGCGATCTGCAGCCATCATTTCACGGCGATGGGTGCGGTGTCGATCATTCCTGATCCGACGATGAAGGTATCGCCCAATGCCCTGCCTTCGACGTGGCTGGCAGTCGGCGTCGCGATCGCAAGCTTCACCGTGATCCTTCTTGCCCTCGCGGGCCTCGCGCTGGACATCCGTGACCAGCGGCGCTCCGCACTCGAAGCCGATCGCATGCGCGGTCTTGCCAATGCGGCCGTCGAAGGACTTCTGGTCTGCGATGGCGAGGTCGCCGTCACCGTCAATCACTCTTTTGCCACGCTCGTCGGATCGACCTCCGACGCCCTCATCGGCACCAGGCTGGACACTTTCATTCCCAACGGCGACACCCGCACCAAGCTGTTTGCGAGCCCAAACCAGCCCGTTGAAGCCGAATTGCGGCATATCGACGGCTCCGTCATTCCGGTCGAGATGATCCTGCGTCCGATCGATTTCGCCGGACATGCCCATCACGTCATCGCCGTTCGCGATCTGCAGGCCCGCAAGCAGGCCGAACAGCACATCCGTTATCTTGCCCATCACGATGCGCTCACATCGCTGCCGAACCGCGGCACGTTCCATGCGCGGCTCGATCAGGAAATCAGCGCATCGTCCACCAGCGGCAAGCGCCTTGCGGTCCTCTGCTTCGATCTCGACAGGTTCAAGGAAGTCAACGATCTGTTCGGACACGCCACGGGCGACAAGGTGCTGAAGACCGTCGCTTCGCGGGTCAGCGCCATTCTCGACCCGGCCTGCATGGTCGCGCGTCTCGGCGGCGATGAATTCGCCGTCCTTGTGCCCGATCTGTCAGGCCCTGCGGCCGCCGGCAAGCTTGCCGAACAGATTCTCGAGGCCCTCGGGTCGGACGCAACACAAAGCGACAACGCGATCTCCTGCAGCATCGGCATCGCCATTTGCCCGGATGACGCGACCAACCGCGAGGTGCTGCTGTCCCATGCGGACACGGCGCTCTATCGCGCCAAGATGGAGGGACGCTCCACCTATCGCTTCTTCGAAGCGAAGATGGGCGCGGAGGTTCACGATCGCCGGGTTCTCGAACACGATCTGCGCCAGGCCATTGCCCGCGGCGAATTCAAGCTGGTCTATCAGCCGCAGGAAGATATCCAGACCCGCACCGTGGTCGGCTTCGAAGCGCTGCTGCGCTGGACGCACAAGACGCGCGGTCCGATTTCACCTGCCGTCTTCATTCCGGTCGCGGAAGAAACCGGCGCCATCCTGCCGATCGGCGAATGGGTACTGCGCGAAGCCTGCAAACAGGCCGCAAGCTGGGAAAAGCCGCTGACCGTCGCGGTGAACGTCTCGGCGGTTCAAATCTACAACGAGAACTTCGTCCATCTCGTGCACGAAGTCCTGCTCGAGACCGGCCTGTCTCCGAAGCGGCTCGAACTCGAGATCACCGAAACGGCGCTGATCCGCGATTTCAACCGCGCGCTCACCGCGCTCCGCCAGATCAAGGCACTGGGCGTCCAGATCGCAATGGACGATTTCGGCACGGGTTATTCGTCGCTCTCCAACCTGCGCGCGTTCCCGTTCGACAAGATCAAGATCGACGGCTCTTTCATCAAATCGGTGGACACCAACGCGCAGGCCGCCGCCATCGTGCGCGCCGTGCTCGGTCTCGGCCGCGGCCTCGGCCTGCCCGTACTGGCGGAAGGCGTCGAGACCCCGGCGGAATTGGCGTTCCTGCAGACGGAAGCGTGCAACGAGGTTCAGGGCTATCTGGTCGGACGGCCTGCCCCGATCTCCACCTTCACGACGCTGACCCACACCGACGAAGTGGCCGGGGACGAAGTGTCCATGCTGATCGCGCGGTCGGCCTGA
PROTEIN sequence
Length: 800
MLKVYNCIAAAHDLRLVTLAAVICALSSFAAINLLRHARASTGHMRHVWLVVSAISTGFGIWSTHFIAMLAFSPGIPSGYNIALTALSLAAAIVLTCAGLAMAMVQNSSFGLWFGGAVVGGGIATMHYLGMAAFEVEGTVLWDPVLVVASILLGTLIGATALPAGLRDASMKWKVTGSLLLTAAICSHHFTAMGAVSIIPDPTMKVSPNALPSTWLAVGVAIASFTVILLALAGLALDIRDQRRSALEADRMRGLANAAVEGLLVCDGEVAVTVNHSFATLVGSTSDALIGTRLDTFIPNGDTRTKLFASPNQPVEAELRHIDGSVIPVEMILRPIDFAGHAHHVIAVRDLQARKQAEQHIRYLAHHDALTSLPNRGTFHARLDQEISASSTSGKRLAVLCFDLDRFKEVNDLFGHATGDKVLKTVASRVSAILDPACMVARLGGDEFAVLVPDLSGPAAAGKLAEQILEALGSDATQSDNAISCSIGIAICPDDATNREVLLSHADTALYRAKMEGRSTYRFFEAKMGAEVHDRRVLEHDLRQAIARGEFKLVYQPQEDIQTRTVVGFEALLRWTHKTRGPISPAVFIPVAEETGAILPIGEWVLREACKQAASWEKPLTVAVNVSAVQIYNENFVHLVHEVLLETGLSPKRLELEITETALIRDFNRALTALRQIKALGVQIAMDDFGTGYSSLSNLRAFPFDKIKIDGSFIKSVDTNAQAAAIVRAVLGLGRGLGLPVLAEGVETPAELAFLQTEACNEVQGYLVGRPAPISTFTTLTHTDEVAGDEVSMLIARSA*