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SCNpilot_expt_1000_bf_scaffold_3704_7

Organism: SCNPILOT_EXPT_1000_BF_Afipia_62_8

partial RP 39 / 55 MC: 2 BSCG 39 / 51 MC: 2 ASCG 11 / 38
Location: comp(4292..5173)

Top 3 Functional Annotations

Value Algorithm Source
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA04_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 65.9
  • Coverage: 287.0
  • Bit_score: 404
  • Evalue 6.60e-110
Cellulose synthase operon protein C {ECO:0000313|EMBL:CEG07762.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.6
  • Coverage: 287.0
  • Bit_score: 408
  • Evalue 8.30e-111
putative O-linked N-acetylglucosamine transferase, SPINDLY family similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 265.0
  • Bit_score: 213
  • Evalue 1.20e-52

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 882
GTGATTGCAGCCAAGCAAGCACTGGCGATCTCGCCTGATCTTGCCGACGCGCATGTGCTGCACAGTTCCGTTCTCATGGAGATGAAGCGCTACCAGGAGGCTATCCCGCTTCTGGAAGACATCATCAGAACAAACCCGGAGACAGAATCGGTAAGAGGGCAACTCTTCGGCGCCAGGATGATGATTTGTAACTGGGATGGTTATGAAAAAGACCGCGCGGAATGTGTTCGCGCGATCGATAAGAATCCTGCCCGGGTCGCTCCCTATGATTCCATCATCGTGACACAGGACCCTGCCCAACTCCTGGCTTGCGCCCTTGCTCAGACGAAAGCGAGCATTCCCGAAGTGAGCCCTATCGCGCGCGGCGAACCGCACGCTCACAAAAGGATTCGCGTCGGCTATGTATCCCCTGATTTTCGAGACCATGCCGTGGGCCGTATCATTGCCGGCCTGTTCGAGCACCATGACAGGACAAGCTTCGAAATCTACGCGTTTTCCACCGCCGCAGATCAATCAGCGTTACGAAAGCGCATTGAATCCGCCTTCGATCATTTCATTGAGATTGAGCAGATGAATGATCGGGAGGCCGCACAGTGCATCCGGGAGAATGAAATCGACATTCTCATCGATTTGGCTGGGCACACTCGGTATACCGGATTGAACGCTATGGCATTCCGGCCCAGCCCCGTTCAAGTGACGTGGCTGGGCTTCCCCGGAACCACCGGCACATCATTCATCGATTACATTATCGCCGATCCAACCGTGCTTCCGATCGAGCACGAGCGATTCTATACGGAGAAAGCTGTCCGGCTTCCGGATACCTATCAACCCAACGACGACCCCTTGAAGGTTGCGGAGGCTCGTGTTCTGCTGCTTCAATAA
PROTEIN sequence
Length: 294
VIAAKQALAISPDLADAHVLHSSVLMEMKRYQEAIPLLEDIIRTNPETESVRGQLFGARMMICNWDGYEKDRAECVRAIDKNPARVAPYDSIIVTQDPAQLLACALAQTKASIPEVSPIARGEPHAHKRIRVGYVSPDFRDHAVGRIIAGLFEHHDRTSFEIYAFSTAADQSALRKRIESAFDHFIEIEQMNDREAAQCIRENEIDILIDLAGHTRYTGLNAMAFRPSPVQVTWLGFPGTTGTSFIDYIIADPTVLPIEHERFYTEKAVRLPDTYQPNDDPLKVAEARVLLLQ*