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SCNpilot_expt_1000_bf_scaffold_3704_13

Organism: SCNPILOT_EXPT_1000_BF_Afipia_62_8

partial RP 39 / 55 MC: 2 BSCG 39 / 51 MC: 2 ASCG 11 / 38
Location: 12978..13343

Top 3 Functional Annotations

Value Algorithm Source
Large-conductance mechanosensitive channel n=2 Tax=Bradyrhizobiaceae RepID=F7QP14_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 91.6
  • Coverage: 119.0
  • Bit_score: 213
  • Evalue 8.90e-53
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.6
  • Coverage: 119.0
  • Bit_score: 213
  • Evalue 1.20e-52
large-conductance mechanosensitive channel similarity KEGG
DB: KEGG
  • Identity: 82.8
  • Coverage: 116.0
  • Bit_score: 196
  • Evalue 3.50e-48

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATGCTCGAGGAGTTCAAGAAATTCGCACTGAAAGGCAATGTCGTCGATCTCGCGGTCGGTGTGATCATCGGCGCGGCTTTCGGGGCGATCGTCAATTCGATGGTGGCCGACATCATCATGCCGGTCATCGGCGCGGTCACCGGTGGCCTCGACTTCTCGAACTATTTCTTGCCGCTCGCCAAGTCGGTCACGGCAACCAACCTCGTTGACGCCAAGAAGCAGGGTGCAGTACTGGCCTATGGCAGCTTCCTGACGCTGACGCTGAACTTCCTCATCGTCGCGTTCGTGCTGTTCCTCGTGATCCGGGTCATGAACCGGTTGAAGGCGAAGGAAGAAGCCGCTCCGGCACCGGCCCGGCGGCGCTGA
PROTEIN sequence
Length: 122
MLEEFKKFALKGNVVDLAVGVIIGAAFGAIVNSMVADIIMPVIGAVTGGLDFSNYFLPLAKSVTATNLVDAKKQGAVLAYGSFLTLTLNFLIVAFVLFLVIRVMNRLKAKEEAAPAPARRR*