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SCNpilot_expt_1000_bf_scaffold_7163_17

Organism: SCNPILOT_EXPT_1000_BF_Afipia_62_8

partial RP 39 / 55 MC: 2 BSCG 39 / 51 MC: 2 ASCG 11 / 38
Location: 10699..11190

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein, partial n=1 Tax=Pseudomonas nitroreducens RepID=UPI00035F5EE1 similarity UNIREF
DB: UNIREF100
  • Identity: 43.8
  • Coverage: 160.0
  • Bit_score: 113
  • Evalue 2.20e-22
Uncharacterized protein {ECO:0000313|EMBL:ETM68693.1}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain M1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.7
  • Coverage: 154.0
  • Bit_score: 114
  • Evalue 1.80e-22
rtxA; structural toxin protein RtxA similarity KEGG
DB: KEGG
  • Identity: 46.9
  • Coverage: 147.0
  • Bit_score: 106
  • Evalue 8.50e-21

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Taxonomy

Pseudomonas sp. M1 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
GTGTTCAACGATGACGGCCCGAGCGCGCCGACTGTAAGCACGACGGGCGCAGAGCCTGTGTTGCTGACGTTCGATGGCGGCCTTGCTGGCAACTATATCGGCTCAGAGGGCAACGGCGATGGTAACTTGTCGCCGACGATTGCATCGGTGAGCTTCGCCGGTGCGTTTACGGTCGGCAACCAGCACGTCTATGGCGCGGACGGTCCGGGCCAGACGGTGATCAGCTACGCATTGCATCTGAAAGTCAGCGAAGGCACGGACTCGCACCTGACATCCGGCGATCAAACGATCCGGTTGTACGAGGACAACGGCGTGATCACCGGCTCGACGGCAACGTCGGAAGGCGGCATTACCACCGGAAATACGATCTTCACGCTGAGCGTGGACTCTTCCACGGGCGTTGTGACGCTCACCCAGTTTCACGCTATCGATCAAGGCGTTGCCGATTCCTATGATGGCGGCGCTTATATCAGCGACATTGCAAAACTTGCG
PROTEIN sequence
Length: 164
VFNDDGPSAPTVSTTGAEPVLLTFDGGLAGNYIGSEGNGDGNLSPTIASVSFAGAFTVGNQHVYGADGPGQTVISYALHLKVSEGTDSHLTSGDQTIRLYEDNGVITGSTATSEGGITTGNTIFTLSVDSSTGVVTLTQFHAIDQGVADSYDGGAYISDIAKLA