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SCNpilot_expt_1000_bf_scaffold_1089_22

Organism: SCNPILOT_EXPT_1000_BF_Acidovorax_65_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(19093..19821)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q974_ACIAP similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 238.0
  • Bit_score: 359
  • Evalue 2.00e-96
  • rbh
winged helix family two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 238.0
  • Bit_score: 359
  • Evalue 6.30e-97
  • rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 243.0
  • Bit_score: 445
  • Evalue 6.60e-122

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Taxonomy

R_Burkholderiales_64_960 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 729
ATGCAACACATCCTGGTGGTGGACGACGATGTCGAAATCACCACACTCCTCACCGACTACCTGACCCGTTTTGGCTATGCCGCCCACGCGGCCTGTGACGCCCAGACGATGCGCGCCCAGATGGCGGCGCAGCCCATCGGCCTGGTGGTGCTGGATGTGATGCTGCCCGGCACCGATGGCATCACGCTGGCGCGTGAGCTGCGCGAACGCTCGCGGGTGCCCATCATCATGCTCACCGCGCGCGCCAACCCCTACGACTGCGTGCTGGGGCTGGAAATGGGCGCGGACGATTACATGGGCAAACCCTTCGAGCCGCGTGAGTTGGTGGCCCGCATCCAGACAGTGCTGCGCCGCACGCGCGGTGCCGAGGCGCCGGTGCGCCAGGGGCCTGATGAAGTGGTGCGGTTTGATGGCTGGACGCTGCACAGCCTGGAGCGGCACCTGGTGTCGCCCGGTGGCATGGTGGTGCCCCTGTCGAACGCCGAGTTCCGCCTGCTGTGCACCTTCTTGCGCATGCCGCGCCGCGTTTTCAGCCGCGACCAGCTCATGGAGCAGGCCCGGGGCCGGGCCATGGATGCGTTTGAACGTAGCATCGACCTGCTGGTGTCGCGCCTGCGCAGCAAGCTCGCGGACGACCCGCGGTCACCTTCCATGATCCGCACCGTGCGCGGTGCCGGGTATCTGTTCAACGTGCAGTCGCTGCAAGGGCAGGTCGGGCAGCCCCACTGA
PROTEIN sequence
Length: 243
MQHILVVDDDVEITTLLTDYLTRFGYAAHAACDAQTMRAQMAAQPIGLVVLDVMLPGTDGITLARELRERSRVPIIMLTARANPYDCVLGLEMGADDYMGKPFEPRELVARIQTVLRRTRGAEAPVRQGPDEVVRFDGWTLHSLERHLVSPGGMVVPLSNAEFRLLCTFLRMPRRVFSRDQLMEQARGRAMDAFERSIDLLVSRLRSKLADDPRSPSMIRTVRGAGYLFNVQSLQGQVGQPH*