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SCNpilot_expt_1000_bf_scaffold_2414_6

Organism: SCNPILOT_EXPT_1000_BF_Acidovorax_65_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 3659..4225

Top 3 Functional Annotations

Value Algorithm Source
tRNA 2-thiocytidine biosynthesis protein TtcA n=1 Tax=Acidovorax sp. NO-1 RepID=H0C4D3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 88.4
  • Coverage: 189.0
  • Bit_score: 329
  • Evalue 2.30e-87
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000256|HAMAP-Rule:MF_01850}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 188.0
  • Bit_score: 361
  • Evalue 9.80e-97
PP-loop domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 191.0
  • Bit_score: 323
  • Evalue 5.10e-86

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Taxonomy

Acidovorax temperans → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGAACGCAGTGATCAACAACCCCAATCCCACCCTCACCCAGGTACACACCGGCTGGACCGACGAGGCCGAAGCACCGCAAGAGCCCACGGCCAACGCAGCCCGCCTGAAAATCGAGCGCGAAACCCACAAGCTCGAAAAGCGCCTGTGCCGCGAGGTCGGCAAGGCCATTGTCGACTTCAACATGATTGAAGAAGGCGACAAGGTGATGGTGTGCATGTCCGGCGGCAAGGACAGCTACGCGCTGCTCGACATCCTGCTCAAGCTCAAGGCCCGCGCGCCCATCCACTTTGACCTGGTGGCGGTCAACCTGGACCAGAAGCAGCCTGGGTTCCCCGAGCATGTGCTGCCCGAATACCTGGCCAGCACCGGCGTGCCGTTCCACATCGAGAACGAAGACACCTACAGCATTGTCAAGAAGCTGATCCCCGAGGGCAAGACCACCTGCAGCCTGTGCAGCCGCCTGCGCCGGGGCATTCTGTACCGCGTGGCCGATGAGCTGGGCTGCACCAAGATCGCGCTGGGCCACCACCGCGACGACATCCTGCAGACGCTGCTGCTAAGATGA
PROTEIN sequence
Length: 189
MNAVINNPNPTLTQVHTGWTDEAEAPQEPTANAARLKIERETHKLEKRLCREVGKAIVDFNMIEEGDKVMVCMSGGKDSYALLDILLKLKARAPIHFDLVAVNLDQKQPGFPEHVLPEYLASTGVPFHIENEDTYSIVKKLIPEGKTTCSLCSRLRRGILYRVADELGCTKIALGHHRDDILQTLLLR*