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SCNpilot_expt_1000_bf_scaffold_3072_26

Organism: SCNPILOT_EXPT_1000_BF_Acidovorax_65_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(20551..21543)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 330.0
  • Bit_score: 641
  • Evalue 1.10e-181
  • rbh
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 330.0
  • Bit_score: 641
  • Evalue 5.00e-181
DNA-directed RNA polymerase subunit alpha n=3 Tax=Bacteria RepID=K0I9Y7_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 330.0
  • Bit_score: 641
  • Evalue 3.60e-181
  • rbh

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Taxonomy

Acidovorax sp. KKS102 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 993
ATGCAAACCAATTTGCTGAAACCCAAGGCGATCAATGTCGAGCAGCTTGGCCACAATCGTGCCAAGGTCGCACTGGAGCCGTTCGAGCGTGGGTACGGCCACACGCTGGGCAATGCCATCCGGCGCGTCCTGCTCTCGTCCATGGTGGGTTACGCAGCGACGGAAGTCACGATTGCAGGCGTTCTGCACGAGTATTCGTCCATCGACGGCGTTCAAGAGGACGTGGTCAACATCCTGTTGAACCTCAAGGGCGTGGTGTTCAAGCTCCACAACCGTGACGAAGTGACACTGAGCCTGCGCAAAGACGGCGAAGGTGTGGTCACTGCCCGTGATATCCAGACCCCTCACGACGTGGAAATCGTCAACCCGGATCACGTGATCGCCAACCTGTCTGCCGGCGGTAAGCTGGACATGCAGATCAAGGTAGAGAAGGGTCGCGGCTACGTGCCCGGTAACCTACGCCGCTATGCCGACGAATCGACCAAGTCGATTGGCCGCATTGTGCTGGACGCTTCGTTCTCTCCCGTGAAGCGCGTGAGCTACACCGTGGAAAGCGCCCGCGTGGAGCAGCGTACCGACCTGGATAAGCTGGTGGTCGAGATCGAAACCAACGGTGCGATCACTGCCGAAGACGCTGTGCGTGCATCGGCCAAGATCCTGGTGGAACAGCTGGCGGTATTTGCGCAGCTCGAAGGCGGCGAACTGGCTGCGTTCGATGCACCTGCAGGCCCACGTGGCAATGCGACGTTCGATCCGATCCTGCTGCGTCCCGTGGACGAGCTGGAACTGACCGTGCGTTCTGCCAACTGCTTGAAGGCGGAGAACATCTATTACATCGGTGACCTGATCCAGCGCACCGAGAACGAGCTGCTCAAGACGCCTAACCTGGGCCGCAAGTCGCTCAACGAAATCAAGGAAGTGCTGGCATCGCGCGGCCTCACCTTGGGCATGAAGCTTGAGAACTGGCCTCCAGCGGGTCTGGACAAGCGTTAA
PROTEIN sequence
Length: 331
MQTNLLKPKAINVEQLGHNRAKVALEPFERGYGHTLGNAIRRVLLSSMVGYAATEVTIAGVLHEYSSIDGVQEDVVNILLNLKGVVFKLHNRDEVTLSLRKDGEGVVTARDIQTPHDVEIVNPDHVIANLSAGGKLDMQIKVEKGRGYVPGNLRRYADESTKSIGRIVLDASFSPVKRVSYTVESARVEQRTDLDKLVVEIETNGAITAEDAVRASAKILVEQLAVFAQLEGGELAAFDAPAGPRGNATFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEIKEVLASRGLTLGMKLENWPPAGLDKR*