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SCNpilot_expt_1000_bf_scaffold_3072_27

Organism: SCNPILOT_EXPT_1000_BF_Acidovorax_65_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(21656..21997)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0002E105FC similarity UNIREF
DB: UNIREF100
  • Identity: 92.0
  • Coverage: 113.0
  • Bit_score: 207
  • Evalue 7.80e-51
30S ribosomal protein S4-like similarity KEGG
DB: KEGG
  • Identity: 95.6
  • Coverage: 113.0
  • Bit_score: 212
  • Evalue 9.90e-53
30S ribosomal protein S4 {ECO:0000255|HAMAP-Rule:MF_01306}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 113.0
  • Bit_score: 206
  • Evalue 2.40e-50

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Taxonomy

Acidovorax ebreus → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 342
CTGGAGTGCCGCCTGGACAACGTGGTGTACCGCATGGGCTTTGGTTCCACCCGTGCCGAAGCGCGCCAGCTCGTGTCGCACAAGGCCATTCTGGTGAATGGTCAGGCCGTGAACATCCCGTCGTTCCTGGTGAAGACGGGTGACGTCGTTTCCGTGCGCGAGAAGTCCAAGAAGCAGGCACGCGTGGTCGAAGCCCTGCAACTGGCGCAGCAAGTGGGTATGCCCGCCTGGGTCGAGGTGAATGCCGACAAGGCCGAGGGTGTCTTCAAGAAGGTGCCGGACCGCGATGAATTCGGCGCCGACATCAACGAATCGCTGATCGTCGAACTGTACTCTCGCTGA
PROTEIN sequence
Length: 114
LECRLDNVVYRMGFGSTRAEARQLVSHKAILVNGQAVNIPSFLVKTGDVVSVREKSKKQARVVEALQLAQQVGMPAWVEVNADKAEGVFKKVPDRDEFGADINESLIVELYSR*