ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1256_3

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: comp(860..1201)

Top 3 Functional Annotations

Value Algorithm Source
type III restriction endonuclease subunit R n=1 Tax=Rhizobium leguminosarum RepID=UPI00036F6D9B similarity UNIREF
DB: UNIREF100
  • Identity: 96.5
  • Coverage: 113.0
  • Bit_score: 217
  • Evalue 7.50e-54
Restriction endonuclease subunit R {ECO:0000313|EMBL:KGE79862.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 113.0
  • Bit_score: 218
  • Evalue 4.70e-54
type III restriction protein res subunit similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 112.0
  • Bit_score: 198
  • Evalue 1.50e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. H41 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 342
GTGAAAAATCTGGTGGTGCTGCGCGGTGGCATGTCGGCGAAGGATCGCAAGCAAGCCAACACGGCGTTGAAGGTCGCAGACGATGATGAGCGTCTGATACTTGCGATAGGGCGCTATATCGGGGAAGGCTTCGATGACGCCCGGCTCGACACGTTGTTCCTGACCATGCCGATCGCCTGGAAGGGAACTCTGGCGCAGTATGTCGGCCGTCTGCATCGCCAGCATGATTGCAAGCGGGACGTCCTGGTCGTCGATTATGTCGACAGCACCGTTCCGGTGCTGGCCCGGATGGCCGCAAAGCGACGATTGGGTTATCGCGCGCTGGGCTATGTGATCGAATGA
PROTEIN sequence
Length: 114
VKNLVVLRGGMSAKDRKQANTALKVADDDERLILAIGRYIGEGFDDARLDTLFLTMPIAWKGTLAQYVGRLHRQHDCKRDVLVVDYVDSTVPVLARMAAKRRLGYRALGYVIE*