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SCNpilot_expt_1000_bf_scaffold_1256_19

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: comp(15343..15576)

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QRK7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.8
  • Coverage: 77.0
  • Bit_score: 146
  • Evalue 1.50e-32
XRE family transcriptional regulator {ECO:0000313|EMBL:EKF57667.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 77.0
  • Bit_score: 146
  • Evalue 2.00e-32
Uncharacterized HTH-type transcriptional regulator in smaI restriction system 5'region similarity KEGG
DB: KEGG
  • Identity: 71.8
  • Coverage: 78.0
  • Bit_score: 101
  • Evalue 1.30e-19

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Taxonomy

Agrobacterium albertimagni → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 234
ATGAAACTCACGGCTCTTTTTGCAAGAAATCTTCGACTCTGTCGGCAGCACCGCGGGCTCTCGCAAGAACGCCTGGCTGTGTTCGCCGGGCTTGACCGAAGCTACATCGGCAAGCTGGAACGGGAGCTGAGTTCTCCGACGCTGGACGCGGTCGAGGCCCTGTCATCTGCCATGCAGATCGATTTCGAGGTTCTGATCCGGCGACAGCCTCCCGATGCCCCAAAAAGGAACTGA
PROTEIN sequence
Length: 78
MKLTALFARNLRLCRQHRGLSQERLAVFAGLDRSYIGKLERELSSPTLDAVEALSSAMQIDFEVLIRRQPPDAPKRN*