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SCNpilot_expt_1000_bf_scaffold_1256_28

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: 20029..21036

Top 3 Functional Annotations

Value Algorithm Source
Lytic transglycosylase catalytic n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F264_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 80.6
  • Coverage: 335.0
  • Bit_score: 532
  • Evalue 4.10e-148
  • rbh
Lytic transglycosylase catalytic {ECO:0000313|EMBL:EHS53193.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 335.0
  • Bit_score: 532
  • Evalue 5.70e-148
lytic transglycosylase, catalytic similarity KEGG
DB: KEGG
  • Identity: 55.5
  • Coverage: 328.0
  • Bit_score: 299
  • Evalue 1.80e-78

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Taxonomy

Rhizobium sp. PDO1-076 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1008
ATGCGCTGCCATCCTTCCCGCGAACCTTCAGGCGTAATCCCCTTGATCGATCGAGCGCCGATCAATCCCCTCGACCCGATCGCCTGCAAGCAAGCCGTTGCGCGCAGCGCAGGTCAGGGGCGGCGGCCTGTTTTCCGGGAAGCGGACGCGTCATCAGGTGTCGCCCGTCCGGAAAATAGTGGCCGACGGCGTAGCCTTGCCCTTGACGGTAGCGAGCACGATGGCAGGCTGATGGCGTTTCGGGACGGCGGTGCTTACGCTGCTGTTCCAGTGATCACGGCGATGTTCGTCGCGGTCATCATGATCGCCGCGCAGCCATGCGTGGCATCGGCTGATCCTCTGAAACCCGATGCCATGTCGGATCGCGCAGTCACGATCGCTTCGCCGTCCGATCCATGGGCAAAGCATATCACTGAAGCTGCCAGCCGTTTCGCCATTCCCGAACGATGGATAAGCGCCGTCATGCAGGCCGAAAGCGATCGTGATCCGCTTGCCGTCTCGCCGAAAGGCGCGATGGGCCTGATGCAGATCATGCTGGCGACATGGACAGAATTACGCACCCGGTATCGCCTTGGCGCCGATCCTTATCAGCCACGTGACAACATTCTTGCGGGCGCTGCCTATCTCGCAGAACTGCATGATCTCTATGGCTTCCCGGGTTTCCTCGCGGCCTACAATGCCGGCCCCGGTCGCTATGAAAAACATCTTGTTTCCGACGAACCACTTCCGACCGAGACTGTCGATTACGTCGCGAAGATTATGTCGCTGATCGACGGGGATACAGCCGCCCCTCAGCGCACGGTCGTTCGCCCTTCGCGCTCTTCATGGTCGATTGCGCCGCTGTTCGCCGCGCGTTCTCCCGCCGGAAATGGTGATGGGAGAGAGACCGCCAATCTCCCCTTCGGCAGTCCTTCCGTCGACCGTGCGATTGTAGATCCGTCGGCGCTTGCACCGCCGTCCGATGGCCTGTTCGTGGTCCGCAACGTCGAACAGGAGGCATTGCGATGA
PROTEIN sequence
Length: 336
MRCHPSREPSGVIPLIDRAPINPLDPIACKQAVARSAGQGRRPVFREADASSGVARPENSGRRRSLALDGSEHDGRLMAFRDGGAYAAVPVITAMFVAVIMIAAQPCVASADPLKPDAMSDRAVTIASPSDPWAKHITEAASRFAIPERWISAVMQAESDRDPLAVSPKGAMGLMQIMLATWTELRTRYRLGADPYQPRDNILAGAAYLAELHDLYGFPGFLAAYNAGPGRYEKHLVSDEPLPTETVDYVAKIMSLIDGDTAAPQRTVVRPSRSSWSIAPLFAARSPAGNGDGRETANLPFGSPSVDRAIVDPSALAPPSDGLFVVRNVEQEALR*