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SCNpilot_expt_1000_bf_scaffold_2738_15

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: 12986..13222

Top 3 Functional Annotations

Value Algorithm Source
tynA; tyramine oxidase; K00276 primary-amine oxidase [EC:1.4.3.21] similarity KEGG
DB: KEGG
  • Identity: 60.9
  • Coverage: 69.0
  • Bit_score: 85
  • Evalue 9.70e-15
Amine oxidase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J117_RHOP2 similarity UNIREF
DB: UNIREF100
  • Identity: 60.9
  • Coverage: 69.0
  • Bit_score: 85
  • Evalue 3.10e-14
Amine oxidase {ECO:0000256|RuleBase:RU000672}; TaxID=1435057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens LBA4213 (Ach5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.1
  • Coverage: 70.0
  • Bit_score: 87
  • Evalue 6.70e-15

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 237
ATGTCCGACCTGCAAACGGCATCGCAGAGTTGCTGCTCGACGTCCGCCCGCCCCACGGGGTCTGAAATCAGACACCCGCTCCAACCGCTGAGCCCCGACGAGATCCGCCGTGTCGCGGACATCGTCCGCCGAAATCCGCCCTACGAGGATGCGATTCGCTTCGAGACCATCGAGCTGCTCGAGCCGAGCAAGGAAGAGGTCCGCGCCTTCAAGCCGGGAAGCCCGATACGTAGATGA
PROTEIN sequence
Length: 79
MSDLQTASQSCCSTSARPTGSEIRHPLQPLSPDEIRRVADIVRRNPPYEDAIRFETIELLEPSKEEVRAFKPGSPIRR*