ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2228_1

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: comp(3..275)

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein radA n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JYS7_HYPDA similarity UNIREF
DB: UNIREF100
  • Identity: 64.8
  • Coverage: 91.0
  • Bit_score: 127
  • Evalue 6.30e-27
DNA repair protein RadA; K04485 DNA repair protein RadA/Sms similarity KEGG
DB: KEGG
  • Identity: 64.8
  • Coverage: 91.0
  • Bit_score: 127
  • Evalue 2.00e-27
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.8
  • Coverage: 91.0
  • Bit_score: 127
  • Evalue 8.80e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hyphomicrobium denitrificans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 273
ATGGCCAAGGCAGCAAAGACGAGCTTCGTCTGTCAGGCGTGCGGTGCGACGTCCTCTCGCTGGGCGGGCAAGTGCACAGCCTGCGGCGAGTGGAATACGATCGTCGAGGAGGCGGGCGTCGCGGCGCTCGCGGCAGCGCCCGGCAGCGGCCTCACGCGCTCGGCCAAGGGCAAACCCACGCCGCTGGAGACGCTTGCCGGCAGCACGGCAGAAGCGCCGCGCATTCCAACAGGCCTGCCCGAACTCGATCGCGTGACCGGTGGCGGCATCGTG
PROTEIN sequence
Length: 91
MAKAAKTSFVCQACGATSSRWAGKCTACGEWNTIVEEAGVAALAAAPGSGLTRSAKGKPTPLETLAGSTAEAPRIPTGLPELDRVTGGGIV