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SCNpilot_expt_1000_bf_scaffold_2228_2

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: 455..1564

Top 3 Functional Annotations

Value Algorithm Source
Carboxynorspermidine/carboxyspermidine decarboxylase {ECO:0000256|PIRNR:PIRNR038941}; Short=CANS DC/CAS DC {ECO:0000256|PIRNR:PIRNR038941};; Short=CANSDC/CASDC {ECO:0000256|PIRNR:PIRNR038941};; EC=4.1.1.96 {ECO:0000256|PIRNR:PIRNR038941};; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 372.0
  • Bit_score: 589
  • Evalue 4.30e-165
Carboxynorspermidine decarboxylase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SGE8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 77.4
  • Coverage: 372.0
  • Bit_score: 589
  • Evalue 3.10e-165
  • rbh
carboxynorspermidine decarboxylase similarity KEGG
DB: KEGG
  • Identity: 74.6
  • Coverage: 362.0
  • Bit_score: 559
  • Evalue 6.30e-157
  • rbh

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Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1110
ATGGCGCCCCGCCTCCCTGCCGATATCCGCACGCCCGCCTACGTTCTCGACGTGGCGTTGCTCAAGCGCAACCTCGCGACGGCGGCCCGCATCCGGCGCGAGGCGGGCGTGAAGATCCTGCTCGCGACCAAGGCCTGGGCCATACCGGCGGCCTTCCCGCTCATGCGCGACACGCTCGACGGCACGACCGCGAGCGGCGAGCAGGAGGCGCGCCTCGGCCGCGAGGAGTTCGGCAAGGAGGTGCACGTCTACGCGCCGGCCTATGGGCCCGGCGAGGTCGAGCGCCTCGTCGGCATTGCCGACCACATCTATTTCAACTCGCCCGGCCAGATTGCGCGCCATCTCGGCACCGTGCAGGCGGCCGGCCGCAAGGTCGGCATCCGCATCAATCCTGGCTATTCGAACGCGACGCTCGGCGGCGCGCTCTATGACCCGTGCGCGCCCGGCTCGCGCTTCGGTACGACGATTGCGGAGATCGACCAGCTCCCTTGGGGCTCGATCGACATCCTGCACACGCACGCGCTGTGCGAGTCGCTCGACGATGGCTCCGTCGGGCTCATCGAGCACGTCGGGCGCACGCTCGGCGACTATGTGCGCAAGGTGAAGGCGGTGAACTTTGGCGGCGGCCACTTCATCAACAAGCCGCACTACAACGTCGATCGCCTGATCGCGGCGCTCAGGGCCTTTCGCGCCGAGTTCGGTGTCGAGGTCATTCTGGAGCCGGGCGCGGGCCTCGTCGTCGACACCGGATGGCTGGTGGCGACCGTGCTCGACATTCACAAGAACGAGCACGACATCGCGATCCTCGACACGTCCGCCTCGACGCACATGCCGGACGTGCTGGAGGTGCCCTATCGGCCCGCCATCATCGGTGCGGGTGCGCCCGGCGAGAAGCCACACAGCTACATTCTCGGTGGCAAGACGTGCATGACGGGCGATGTGATCGGCGACTACTCGTTCGACAAGCCGCTGCAACCCGGCGACCGGCTGATCTTCACGGACATGATGCAGTACTCGTTCGTGAAGAGCACGACTTTCAACGGCACGCCGCTTCCGGACCTCGCCATGCTGGAGGAGGATGGCACCTACCGCGTGATCAAGACTTTCTGA
PROTEIN sequence
Length: 370
MAPRLPADIRTPAYVLDVALLKRNLATAARIRREAGVKILLATKAWAIPAAFPLMRDTLDGTTASGEQEARLGREEFGKEVHVYAPAYGPGEVERLVGIADHIYFNSPGQIARHLGTVQAAGRKVGIRINPGYSNATLGGALYDPCAPGSRFGTTIAEIDQLPWGSIDILHTHALCESLDDGSVGLIEHVGRTLGDYVRKVKAVNFGGGHFINKPHYNVDRLIAALRAFRAEFGVEVILEPGAGLVVDTGWLVATVLDIHKNEHDIAILDTSASTHMPDVLEVPYRPAIIGAGAPGEKPHSYILGGKTCMTGDVIGDYSFDKPLQPGDRLIFTDMMQYSFVKSTTFNGTPLPDLAMLEEDGTYRVIKTF*