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SCNpilot_expt_1000_bf_scaffold_2708_14

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: comp(16181..17413)

Top 3 Functional Annotations

Value Algorithm Source
Permease YjgP/YjgQ family protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JYQ5_HYPDA similarity UNIREF
DB: UNIREF100
  • Identity: 47.4
  • Coverage: 403.0
  • Bit_score: 372
  • Evalue 5.00e-100
  • rbh
Permease YjgP/YjgQ family protein {ECO:0000313|EMBL:CPR21622.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.8
  • Coverage: 396.0
  • Bit_score: 381
  • Evalue 1.20e-102
permease YjgP/YjgQ family protein; K07091 lipopolysaccharide export system permease protein similarity KEGG
DB: KEGG
  • Identity: 47.4
  • Coverage: 403.0
  • Bit_score: 372
  • Evalue 1.60e-100
  • rbh

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Taxonomy

No taxonomy information

Sequences

DNA sequence
Length: 1233
ATGAGCACGCTCTCACGCTATATTTTCCGTCAGGCAGCGACGACGACGGTCATGATCGTCATCTCCCTGACCTCTCTCGTGTGGATCGCGCTGGCGCTCCGCCAGCTCAACCTCGTCACCGCACAGGGCCAGGACGCATTCGCCTTCCTGAAGATCACGCTGCTCGGCCTGCCGAGCCTGATGGCGGTCATTGCGCCGGTGGCGCTGCTCATTGCGTCCATTCAGCTTCTCAATCGACTGAGCGCGGACAGCGAGCTGATCGTGATGACGGCGGCCGGCGCCAGGGTATGGGCACCGGCGCGGCCGCTGCTCTTGCTGGCCGTGCTGGTGAGTCTCGTTGTCCTGCTGTTCAACTTTGTCGTGATGCCCTGGGCGAGCCGCGAGCTGCGTGATGCCATCATCGCGGTCCGCACGGACCTCATCACGCAGGTCATCCAGCCGGGCCGCTTCACGAGCCCGGAACGCGGGCTCACTTTCCACGTGCGCGACCGCGCGCACTCGGGTGAGCTCCTCGGCCTCGTGCTCCACGATGCCCGCGATGGCAAGCAGACGACGACCTTCCTCGCCGAGCGCGCACGAATCGTGAAGCAGAGCGGCGAGACCTTCATGCTCATGCAGACCGGTCACATCCTGCGCCGGGCGGCACCGGGCGAGCCGACTCAGATCATTGCCTTCGAGAGCTACGGCGTTGATCTTGCTCACTTCGAGGCCAAGACCGAGCAGCGGGGACTGCGCCCGCGCGAGCGCTACTTGAGCGAACTGCTGAACCCGGCGCCTCAGGATGTCGCCACGTCACGTGCCCGCAACCTGATCGTCGAGGAGCTGCACGAGCGCTTCTCGAGCCCGCTCTATCCGCTCACGTTCGTGATGATCGCCGTCGCCTTGCTCGGCCAGGCGCGGACGACGCGCCAGGGACGCGGGCAGGCGCTCATCCTCGCGTTCGTTCTGGCCACGGCCGCCCGCGTCGGCGGTCTGACCGTGACCAATCTCATCAGCGTCACCCCCACGGCCATCCCGCTGGTCTACGCAATCCCTCTCGGCACAGCCTTGCTGGCAGCGACGCACGCCCATGCTGGAATGCGCCCGCGCCGCACGAATACGCCTCTGGCCCGCGCGGCGGCAGCGATCGGCGAGCTGTTCGATCGACTTGGCGAGCGCCGGCGTGCCCGGCGCGCGGCGTCGCAGCGTCGGCCCACATCGGGAGCCCACGGCGTGGGAGTGCCCAGCCGATGA
PROTEIN sequence
Length: 411
MSTLSRYIFRQAATTTVMIVISLTSLVWIALALRQLNLVTAQGQDAFAFLKITLLGLPSLMAVIAPVALLIASIQLLNRLSADSELIVMTAAGARVWAPARPLLLLAVLVSLVVLLFNFVVMPWASRELRDAIIAVRTDLITQVIQPGRFTSPERGLTFHVRDRAHSGELLGLVLHDARDGKQTTTFLAERARIVKQSGETFMLMQTGHILRRAAPGEPTQIIAFESYGVDLAHFEAKTEQRGLRPRERYLSELLNPAPQDVATSRARNLIVEELHERFSSPLYPLTFVMIAVALLGQARTTRQGRGQALILAFVLATAARVGGLTVTNLISVTPTAIPLVYAIPLGTALLAATHAHAGMRPRRTNTPLARAAAAIGELFDRLGERRRARRAASQRRPTSGAHGVGVPSR*