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SCNpilot_expt_1000_bf_scaffold_3511_18

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: comp(15267..15977)

Top 3 Functional Annotations

Value Algorithm Source
Branched-chain amino acid ABC-type transport system, permease id=4836283 bin=GWC2_Methylomirabilis_70_16 species=Burkholderia glumae genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 56.8
  • Coverage: 234.0
  • Bit_score: 251
  • Evalue 9.80e-64
Branched-chain amino acid ABC-type transport system, permease similarity KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 233.0
  • Bit_score: 188
  • Evalue 2.40e-45
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.6
  • Coverage: 235.0
  • Bit_score: 268
  • Evalue 1.10e-68

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Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
GTGCTTGCGATCGTCATCATTGGCGCATCGCTCGTCGGTCTCTACGTCGAGCGGCTCTGCTTCCGTCCTTTCGGCGAAGCCGCTCGCACGGCCTCCATGGTCGCGAGCTTCGCACTCTGGATGCAGATCGAGGAAGCGGCCATGCACATGCTGCCCCAGCATATGAACCCCTTCCCGCCTCTTCTCGCCGCCCCGCCGTTGGAGATCGGGCCGCTCATGCTGCGCGCCGACCATCTCATCATGCTCGCGGCGACACTGCTGCTCGCGGGGGCAGTCACCTATCTGCTCGCACGCACGAAACTGGGGCTCGCCATCCGCGCCGTGATCGACCAGCCGCGCGCGGCGGCGATCGTCGGCATCCATGTCGAGCGCATCATGATGCTGACATTCGTGCTCGCTTCGGCAATCGGCGGGTTTGCGGGCTTTCTCATTGCCGCGACGGACGCGCAAGTGACCGCCATGATGGGCATGTGGGCAACCACCAAGGGCCTCGTCGCGATGATGCTCGGCGGGCTCGGCTCGGTAAGAGGCGCCATTGCCGGCGGGCTTCTGCTCGGCGTCCTCGAAGCGCACGCGCAGTGGTTTCTCGGGCCGCAGGTGCGCGACATGGTGGCCTGGGGCCTGCTGTTCGTGATTCTGGCCTTCTGGCCAGGTGGCCTGATGGGCGCAAAGGCGCTCGACCGCACAATGGCGGTCGGTCGGCGCGTCTGA
PROTEIN sequence
Length: 237
VLAIVIIGASLVGLYVERLCFRPFGEAARTASMVASFALWMQIEEAAMHMLPQHMNPFPPLLAAPPLEIGPLMLRADHLIMLAATLLLAGAVTYLLARTKLGLAIRAVIDQPRAAAIVGIHVERIMMLTFVLASAIGGFAGFLIAATDAQVTAMMGMWATTKGLVAMMLGGLGSVRGAIAGGLLLGVLEAHAQWFLGPQVRDMVAWGLLFVILAFWPGGLMGAKALDRTMAVGRRV*