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SCNpilot_expt_1000_bf_scaffold_3511_19

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: comp(16010..16177)

Top 3 Functional Annotations

Value Algorithm Source
Branched-chain amino acid ABC-type transport system, permease id=14625855 bin=bin7_NC10_sister species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 50.0
  • Bit_score: 73
  • Evalue 6.60e-11
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 50.0
  • Bit_score: 89
  • Evalue 1.20e-15

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Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 168
ATGGCGCCTGTCGATCTCGCCCAGAACACGCTCGATGGGCTGATGATCGGCTCTTCCTACGCGCTGCTGGCGATCGGCTTCACCTTGATCTTCGGCGTCATGCGGCGCCTGAACCTCGCCTATGGCCCGACGATCATGGCGGGCGTCTATCTCGGCACAGCAGCGTAG
PROTEIN sequence
Length: 56
MAPVDLAQNTLDGLMIGSSYALLAIGFTLIFGVMRRLNLAYGPTIMAGVYLGTAA*