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SCNpilot_expt_1000_bf_scaffold_3511_23

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: comp(18593..19471)

Top 3 Functional Annotations

Value Algorithm Source
Branched-chain amino acid ABC-type transport system, permease components id=4836314 bin=GWC2_Methylomirabilis_70_16 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 65.3
  • Coverage: 285.0
  • Bit_score: 376
  • Evalue 3.30e-101
  • rbh
livH; High-affinity branched-chain amino acid transport system permease protein LivH similarity KEGG
DB: KEGG
  • Identity: 36.9
  • Coverage: 290.0
  • Bit_score: 175
  • Evalue 2.70e-41
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.7
  • Coverage: 292.0
  • Bit_score: 379
  • Evalue 3.20e-102

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Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 879
ATGCTGATCGTTGATCTCGTCCAATCGATCGTCGATGGGCTGCTATTCGGCGCCACATATGCCCTGATCGGCATCGGCTTCACGCTGGTGTTCGGCGTCATGCACAAGATCAATATGGCGTATGCGGCCGCCTCCGTCGGCGCTGCCTACGCGGCATTGCGCCTGATCGCCTTGATTGGCGGACCTGCCTGGGCCTCGCTGCTCATCGCGGCGGCCGCAGGTGGTGTCTTCGGCCTCATCATCTACTGGCTCTGCTTCCGTTTCATTCCATTGTCGAACCCGCTTGCGACGCTGATGTCGACCGTCGGGATGTTCCTTCTTGCCGAGGAGATCATCGTCCACACGACCGACGGCATGCCCCAGAACTACCCCGTCGTCGTACGCGGCATTCTCGATATGGGCGAGTTCATGATCCGCGGCGATCTCGTGTTCGTCTTCGTGTGCGCCCTGCTGGCGATGGTCGTGCTTCTTTACCTGCTCTACCGGACCAAGCTCGGCATAGCGACGCGCGCTGTCTCGCAGCAGCCGGTGGCCGCTCAGCTCGTCGGCATCCGTCTCAATCACATCAACGCGCTGACGTTCATCGTCACCGGCATGCTCGGCGGCTTCGCTGGCGCGCTCATCGGCTCGGCGGTCGGTCTGCTGTCGCCGCTTCTGGTCATCCCCCTGACCATCAAGGGCCTGATCGTGACCGTCATCGGCGGACTCGGGAGCATTCCAGGCGCGATCATAGCGGGCCTTCTGGTCGGCATGGCGGAGAATGTCTTCCAGTACTTCCGCGGCGTGACTGAGCGCGACATCTACGTCATGCTCTTGCTCTTCGTTTTCCTCGTCTTCCGCCCGGGCGGCATCTTTTCGAATACCGTAAAGCGCGATTGA
PROTEIN sequence
Length: 293
MLIVDLVQSIVDGLLFGATYALIGIGFTLVFGVMHKINMAYAAASVGAAYAALRLIALIGGPAWASLLIAAAAGGVFGLIIYWLCFRFIPLSNPLATLMSTVGMFLLAEEIIVHTTDGMPQNYPVVVRGILDMGEFMIRGDLVFVFVCALLAMVVLLYLLYRTKLGIATRAVSQQPVAAQLVGIRLNHINALTFIVTGMLGGFAGALIGSAVGLLSPLLVIPLTIKGLIVTVIGGLGSIPGAIIAGLLVGMAENVFQYFRGVTERDIYVMLLLFVFLVFRPGGIFSNTVKRD*